RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 A8MXQ7 604 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 C6orf10Q5SRN2 563 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 MIGA2Q7L4E1 593 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 P3H2Q8IVL5 708 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 ARHGEF1Q92888 912 aaKnown RBP13.57□□□□□ -0.24
RNF43-201ENST00000407977 TMEM117Q9H0C3 514 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 GUCY1A2P33402 732 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 NPEPPSP55786 919 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 ARHGEF6Q15052 776 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 NLRP9Q7RTR0 991 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 IGDCC4Q8TDY8 1250 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 CAVIN3Q969G5 261 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 FAR2Q96K12 515 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 APPL1Q9UKG1 709 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 MINPP1Q9UNW1 487 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 A2ML1A8K2U0 1454 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 CEP170Q5SW79 1584 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 THRAP10827 490 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 CALB2P22676 271 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 FOXD4Q12950 439 aaPredicted RBP13.57□□□□□ -0.24
RNF43-201ENST00000407977 ANO4Q32M45 955 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 BBS7Q8IWZ6 715 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 CLMNQ96JQ2 1002 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 TMEM245Q9H330 911 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 ARHGEF38Q9NXL2 777 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 PNMA3Q9UL41 463 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 XPO1O14980 1071 aaKnown RBP13.57□□□□□ -0.24
RNF43-201ENST00000407977 TPI1P60174 286 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 DNAJC3Q13217 504 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 ZNF235Q14590 738 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 ACBD5Q5T8D3 534 aaPredicted RBP13.57□□□□□ -0.24
RNF43-201ENST00000407977 KLHDC7AQ5VTJ3 777 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 ELMSAN1Q6PJG2 1045 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 EEPD1Q7L9B9 569 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 SLC13A5Q86YT5 568 aaPredicted RBP13.57□□□□□ -0.24
RNF43-201ENST00000407977 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 PTPRN2Q92932 1015 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 MAP3K14Q99558 947 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 CNPY3Q9BT09 278 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 EPS8L2Q9H6S3 715 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 GTF3C4Q9UKN8 822 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 CHMP2BQ9UQN3 213 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 BCS1LQ9Y276 419 aa13.57□□□□□ -0.24
RNF43-201ENST00000407977 FAM95CA0A1B0GW59 222 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 PDGFRAP16234 1089 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 NMT1P30419 496 aaKnown RBP13.56□□□□□ -0.24
RNF43-201ENST00000407977 SNAP25P60880 206 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 TRIM28Q13263 835 aaKnown RBP13.56□□□□□ -0.24
RNF43-201ENST00000407977 RABL6Q3YEC7 729 aaPredicted RBP13.56□□□□□ -0.24
RNF43-201ENST00000407977 CCNJLQ8IV13 435 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 CASKIN2Q8WXE0 1202 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 PHF21AQ96BD5 680 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 CNDP1Q96KN2 507 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 CAAP1Q9H8G2 361 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 DGAT1O75907 488 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 GSNP06396 782 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 STIP1P31948 543 aaKnown RBP13.56□□□□□ -0.24
RNF43-201ENST00000407977 RAD51Q06609 339 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 EAPPQ56P03 285 aaPredicted RBP13.56□□□□□ -0.24
RNF43-201ENST00000407977 SWSAP1Q6NVH7 229 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 TRAF7Q6Q0C0 670 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 DDX42Q86XP3 938 aaKnown RBP eCLIP13.56□□□□□ -0.24
RNF43-201ENST00000407977 NUP93Q8N1F7 819 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 PDCD6IPQ8WUM4 868 aaKnown RBP13.56□□□□□ -0.24
RNF43-201ENST00000407977 CPVLQ9H3G5 476 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 NDFIP2Q9NV92 336 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 WHRNQ9P202 907 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 F5H6K3 240 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 TNPO2O14787 897 aaKnown RBP13.56□□□□□ -0.24
RNF43-201ENST00000407977 COPB2P35606 906 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 KCNK10P57789 538 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 KLRC3Q07444 240 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 CHI3L2Q15782 390 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 SGSM1Q2NKQ1 1148 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 PLEKHM3Q6ZWE6 761 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 TPCN2Q8NHX9 752 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 APBB2Q92870 758 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 ASIC4Q96FT7 647 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 CAB39Q9Y376 341 aaPredicted RBP13.56□□□□□ -0.24
RNF43-201ENST00000407977 TLR2O60603 784 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 TARSP26639 723 aaKnown RBP13.56□□□□□ -0.24
RNF43-201ENST00000407977 CRKP46108 304 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 PDAP1Q13442 181 aaKnown RBP13.56□□□□□ -0.24
RNF43-201ENST00000407977 Q3C1V9 767 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 ATXN7L3BQ96GX2 97 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 FAM49AQ9H0Q0 323 aaPredicted RBP13.56□□□□□ -0.24
RNF43-201ENST00000407977 MYMKA6NI61 221 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 PPP1R3GB7ZBB8 358 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 NME3Q13232 169 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 PDK1Q15118 436 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 RBM43Q6ZSC3 357 aaKnown RBP13.56□□□□□ -0.24
RNF43-201ENST00000407977 ARID3BQ8IVW6 561 aaPredicted RBP13.56□□□□□ -0.24
RNF43-201ENST00000407977 MED15Q96RN5 788 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 ISCA1Q9BUE6 129 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 CELF4Q9BZC1 486 aaKnown RBP13.56□□□□□ -0.24
RNF43-201ENST00000407977 PLEKHA5Q9HAU0 1116 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 DIABLOQ9NR28 239 aa13.56□□□□□ -0.24
RNF43-201ENST00000407977 CAND2O75155 1236 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 PSMC3P17980 439 aa13.55□□□□□ -0.24
RNF43-201ENST00000407977 PSMA4P25789 261 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms