RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 NPAS3Q8IXF0 933 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 BEST2Q8NFU1 509 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 POMGNT1Q8WZA1 660 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 ZNF396Q96N95 335 aaPredicted RBP20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 FRMD3A2A2Y4 597 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 KRBA1A5PL33 1030 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 SPTLC1O15269 473 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 PI15O43692 258 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 GCNT3O95395 438 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 LILRA4P59901 499 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 C9orf57Q5W0N0 161 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 POTEHQ6S545 545 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 DSTYKQ6XUX3 929 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 RNF19BQ6ZMZ0 732 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 ZSWIM2Q8NEG5 633 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 GPR152Q8TDT2 470 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 OLFML3Q9NRN5 406 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 PANK4Q9NVE7 773 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 WNT16Q9UBV4 365 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 CA14Q9ULX7 337 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 MRPS23Q9Y3D9 190 aaKnown RBP20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 INSL5Q9Y5Q6 135 aa20.92■□□□□ 0.94
SMARCB1-204ENST00000407422 PPP6R2O75170 966 aa20.91■□□□□ 0.94
SMARCB1-204ENST00000407422 OR4Q2P0C623 313 aa20.91■□□□□ 0.94
SMARCB1-204ENST00000407422 CPB1P15086 417 aa20.91■□□□□ 0.94
SMARCB1-204ENST00000407422 CLCN5P51795 746 aa20.91■□□□□ 0.94
SMARCB1-204ENST00000407422 L1TD1Q5T7N2 865 aaKnown RBP20.91■□□□□ 0.94
SMARCB1-204ENST00000407422 SPRYD3Q8NCJ5 442 aa20.91■□□□□ 0.94
SMARCB1-204ENST00000407422 ACCSQ96QU6 501 aa20.91■□□□□ 0.94
SMARCB1-204ENST00000407422 ASB7Q9H672 318 aa20.91■□□□□ 0.94
SMARCB1-204ENST00000407422 AFF4Q9UHB7 1163 aaKnown RBP20.91■□□□□ 0.94
SMARCB1-204ENST00000407422 KCNH3Q9ULD8 1083 aa20.91■□□□□ 0.94
SMARCB1-204ENST00000407422 DERAQ9Y315 318 aa20.91■□□□□ 0.94
SMARCB1-204ENST00000407422 TCHHQ07283 1943 aa20.91■□□□□ 0.94
SMARCB1-204ENST00000407422 TSC2P49815 1807 aa20.91■□□□□ 0.94
SMARCB1-204ENST00000407422 PIRO00625 290 aa20.9■□□□□ 0.94
SMARCB1-204ENST00000407422 VNN2O95498 520 aa20.9■□□□□ 0.94
SMARCB1-204ENST00000407422 HSP90AA1P07900 732 aaKnown RBP20.9■□□□□ 0.94
SMARCB1-204ENST00000407422 ZSCAN22P10073 491 aaPredicted RBP20.9■□□□□ 0.94
SMARCB1-204ENST00000407422 PTPN2P17706 415 aa20.9■□□□□ 0.94
SMARCB1-204ENST00000407422 MRE11P49959 708 aa20.9■□□□□ 0.94
SMARCB1-204ENST00000407422 PKP1Q13835 747 aa20.9■□□□□ 0.94
SMARCB1-204ENST00000407422 E2F4Q16254 413 aa20.9■□□□□ 0.94
SMARCB1-204ENST00000407422 USP37Q86T82 979 aa20.9■□□□□ 0.94
SMARCB1-204ENST00000407422 SENP8Q96LD8 212 aa20.9■□□□□ 0.94
SMARCB1-204ENST00000407422 CORO1BQ9BR76 489 aa20.9■□□□□ 0.94
SMARCB1-204ENST00000407422 C2CD2Q9Y426 696 aa20.9■□□□□ 0.94
SMARCB1-204ENST00000407422 ANO9A1A5B4 782 aa20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 H0Y858 1186 aa20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 NRG2O14511 850 aaPredicted RBP20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 GALR2O43603 387 aaPredicted RBP20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 YEATS4O95619 227 aa20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 WNT7BP56706 349 aa20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 POSTNQ15063 836 aa20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 SHC4Q6S5L8 630 aa20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 EFCAB13Q8IY85 973 aa20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 SAAL1Q96ER3 474 aa20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 MCRS1Q96EZ8 462 aa20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 PGLYRP2Q96PD5 576 aa20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 FAM213AQ9BRX8 229 aa20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 FAM86C1Q9NVL1 165 aa20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 EXOC7Q9UPT5 735 aa20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 PCDHB13Q9Y5F0 798 aa20.89■□□□□ 0.94
SMARCB1-204ENST00000407422 CEBPBP17676 345 aa20.89■□□□□ 0.93
SMARCB1-204ENST00000407422 AOC1P19801 751 aa20.89■□□□□ 0.93
SMARCB1-204ENST00000407422 GPC5P78333 572 aa20.89■□□□□ 0.93
SMARCB1-204ENST00000407422 TWF1Q12792 350 aa20.89■□□□□ 0.93
SMARCB1-204ENST00000407422 OVOS1Q6IE37 1185 aa20.89■□□□□ 0.93
SMARCB1-204ENST00000407422 GLIS3Q8NEA6 775 aa20.89■□□□□ 0.93
SMARCB1-204ENST00000407422 HPS3Q969F9 1004 aa20.89■□□□□ 0.93
SMARCB1-204ENST00000407422 TCEAL4Q96EI5 215 aa20.89■□□□□ 0.93
SMARCB1-204ENST00000407422 KXD1Q9BQD3 176 aa20.89■□□□□ 0.93
SMARCB1-204ENST00000407422 AVENQ9NQS1 362 aaPredicted RBP20.89■□□□□ 0.93
SMARCB1-204ENST00000407422 KBTBD4Q9NVX7 518 aa20.89■□□□□ 0.93
SMARCB1-204ENST00000407422 CEP72Q9P209 647 aa20.89■□□□□ 0.93
SMARCB1-204ENST00000407422 GTF3C3Q9Y5Q9 886 aa20.89■□□□□ 0.93
SMARCB1-204ENST00000407422 PRPF6O94906 941 aaKnown RBP20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 F13A1P00488 732 aa20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 TYMPP19971 482 aa20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 CCR2P41597 374 aa20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 NUBP1P53384 320 aa20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 PRSS36Q5K4E3 855 aa20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 MTSS1LQ765P7 747 aa20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 SYCP3Q8IZU3 236 aa20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 DHX58Q96C10 678 aa20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 TMEM209Q96SK2 561 aa20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 TNMDQ9H2S6 317 aa20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 CRISPLD1Q9H336 500 aa20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 SLC2A4RGQ9NR83 387 aa20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 DPP3Q9NY33 737 aa20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 ZFHX2Q9C0A1 2572 aaPredicted RBP20.88■□□□□ 0.93
SMARCB1-204ENST00000407422 WDR87Q6ZQQ6 2873 aa20.87■□□□□ 0.93
SMARCB1-204ENST00000407422 TULP1O00294 542 aaPredicted RBP20.87■□□□□ 0.93
SMARCB1-204ENST00000407422 STK25O00506 426 aa20.87■□□□□ 0.93
SMARCB1-204ENST00000407422 CUTAO60888 179 aa20.87■□□□□ 0.93
SMARCB1-204ENST00000407422 ODC1P11926 461 aa20.87■□□□□ 0.93
SMARCB1-204ENST00000407422 POU5F1Q01860 360 aaKnown RBP20.87■□□□□ 0.93
SMARCB1-204ENST00000407422 CCDC65Q8IXS2 484 aa20.87■□□□□ 0.93
SMARCB1-204ENST00000407422 HS6ST3Q8IZP7 471 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms