RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 APEX2Q9UBZ4 518 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 RFX7Q2KHR2 1363 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 PRKCBP05771 671 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 TRIP4Q15650 581 aaPredicted RBP12.61□□□□□ -0.39
SMCR8-201ENST00000406438 DNAL1Q4LDG9 190 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 PABPC5Q96DU9 382 aaKnown RBP12.61□□□□□ -0.39
SMCR8-201ENST00000406438 NMRK1Q9NWW6 199 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 ZC3H7BQ9UGR2 993 aaKnown RBP12.61□□□□□ -0.39
SMCR8-201ENST00000406438 NARFQ9UHQ1 456 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 DISP1Q96F81 1524 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 CFAP99D6REC4 459 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 SV2CQ496J9 727 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 IYDQ6PHW0 289 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 HAUS6Q7Z4H7 955 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 SEPT3Q9UH03 358 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 MAGI2Q86UL8 1455 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 EVPLLA8MZ36 301 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 CD2BP2O95400 341 aaKnown RBP12.61□□□□□ -0.39
SMCR8-201ENST00000406438 POLBP06746 335 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 TXNP10599 105 aaKnown RBP12.61□□□□□ -0.39
SMCR8-201ENST00000406438 ENO3P13929 434 aaPredicted RBP12.61□□□□□ -0.39
SMCR8-201ENST00000406438 ACADSBP45954 432 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 YIPF3Q9GZM5 350 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 MAN1C1Q9NR34 630 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 H0YC42 278 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 APOA4P06727 396 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 IRF1P10914 325 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 SERPINB9P50453 376 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 MTMR2Q13614 643 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 SLFNL1Q499Z3 407 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 CEP78Q5JTW2 689 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 MFSD4BQ5TF39 518 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 SPATA18Q8TC71 538 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 USP13Q92995 863 aaPredicted RBP12.61□□□□□ -0.39
SMCR8-201ENST00000406438 DCP1AQ9NPI6 582 aaPredicted RBP12.61□□□□□ -0.39
SMCR8-201ENST00000406438 SLC16A3O15427 465 aaKnown RBP12.61□□□□□ -0.39
SMCR8-201ENST00000406438 SLC26A4O43511 780 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 HDAC6Q9UBN7 1215 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 CYP26A1O43174 497 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 SGSM1Q2NKQ1 1148 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 BBS7Q8IWZ6 715 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 ZNF513Q8N8E2 541 aaPredicted RBP12.6□□□□□ -0.39
SMCR8-201ENST00000406438 SEPT5Q99719 369 aaPredicted RBP12.6□□□□□ -0.39
SMCR8-201ENST00000406438 PAPOLBQ9NRJ5 636 aaKnown RBP12.6□□□□□ -0.39
SMCR8-201ENST00000406438 SCN3BQ9NY72 215 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 PSMC3IPQ9P2W1 217 aaPredicted RBP12.6□□□□□ -0.39
SMCR8-201ENST00000406438 A0A1W2PQC6 194 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 RPS6KA4O75676 772 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 TRIM8Q9BZR9 551 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 EYA4O95677 639 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 GUCA1AP43080 201 aaPredicted RBP12.6□□□□□ -0.39
SMCR8-201ENST00000406438 DEFA1P59665 94 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 DEFA3P59666 94 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 MTFR1Q15390 333 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 SLC35G2Q8TBE7 412 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 KRT84Q9NSB2 600 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 KCND2Q9NZV8 630 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 EEF2KO00418 725 aaKnown RBP12.6□□□□□ -0.39
SMCR8-201ENST00000406438 PHF2O75151 1096 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 TOB2Q14106 344 aaPredicted RBP12.6□□□□□ -0.39
SMCR8-201ENST00000406438 QRICH1Q2TAL8 776 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 OOSP2Q86WS3 158 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 TBC1D10CQ8IV04 446 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 LPAR1Q92633 364 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 ZCWPW1Q9H0M4 648 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 AMACRQ9UHK6 382 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 VPS9D1Q9Y2B5 631 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 MAGEB2O15479 319 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 NCK2O43639 380 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 KLHL2O95198 593 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 GYS2P54840 703 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 ATP2C1P98194 919 aaPredicted RBP12.6□□□□□ -0.39
SMCR8-201ENST00000406438 STAG2Q8N3U4 1231 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 CPA5Q8WXQ8 436 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 KLHL11Q9NVR0 708 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 APPL1Q9UKG1 709 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 CDY2AQ9Y6F7 541 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 CDY1Q9Y6F8 540 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 PCSK1P29120 753 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 USP10Q14694 798 aaKnown RBP12.6□□□□□ -0.39
SMCR8-201ENST00000406438 MAPRE1Q15691 268 aaKnown RBP12.6□□□□□ -0.39
SMCR8-201ENST00000406438 SLC30A5Q8TAD4 765 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 ARL2BPQ9Y2Y0 163 aa12.6□□□□□ -0.39
SMCR8-201ENST00000406438 TRIM65Q6PJ69 517 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 FGD2Q7Z6J4 655 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 SLC44A5Q8NCS7 719 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 RAD18Q9NS91 495 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 SPASTQ9UBP0 616 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 PITPNM2Q9BZ72 1349 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 PTK6Q13882 451 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMCR8-201ENST00000406438 RSPH10B2B2RC85 870 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 PDGFRBP09619 1106 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 RSPH10BP0C881 870 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 KCNB1Q14721 858 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 DCAF6Q58WW2 860 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 C11orf96Q7Z7L8 435 aa12.59□□□□□ -0.39
SMCR8-201ENST00000406438 GEMIN8Q9NWZ8 242 aaKnown RBP12.59□□□□□ -0.39
SMCR8-201ENST00000406438 TBL3Q12788 808 aaKnown RBP12.59□□□□□ -0.39
SMCR8-201ENST00000406438 STX3Q13277 289 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms