RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 ARHGEF19Q8IW93 802 aa23.61■■□□□ 1.37
EPCAM-202ENST00000405271 PPM1KQ8N3J5 372 aa23.61■■□□□ 1.37
EPCAM-202ENST00000405271 TIFAQ96CG3 184 aa23.61■■□□□ 1.37
EPCAM-202ENST00000405271 UROC1Q96N76 676 aa23.61■■□□□ 1.37
EPCAM-202ENST00000405271 NUCKS1Q9H1E3 243 aaKnown RBP23.61■■□□□ 1.37
EPCAM-202ENST00000405271 NLRC4Q9NPP4 1024 aa23.61■■□□□ 1.37
EPCAM-202ENST00000405271 DNAJC12Q9UKB3 198 aa23.61■■□□□ 1.37
EPCAM-202ENST00000405271 PIRO00625 290 aa23.6■■□□□ 1.37
EPCAM-202ENST00000405271 KCNJ6P48051 423 aa23.6■■□□□ 1.37
EPCAM-202ENST00000405271 ARID5BQ14865 1188 aa23.6■■□□□ 1.37
EPCAM-202ENST00000405271 ZNF667Q5HYK9 610 aa23.6■■□□□ 1.37
EPCAM-202ENST00000405271 CCDC186Q7Z3E2 898 aa23.6■■□□□ 1.37
EPCAM-202ENST00000405271 BAP1Q92560 729 aa23.6■■□□□ 1.37
EPCAM-202ENST00000405271 GUCD1Q96NT3 240 aa23.6■■□□□ 1.37
EPCAM-202ENST00000405271 NIF3L1Q9GZT8 377 aa23.6■■□□□ 1.37
EPCAM-202ENST00000405271 TMEM265A0A087WTH1 108 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 RPL9P32969 192 aaKnown RBP23.59■■□□□ 1.37
EPCAM-202ENST00000405271 KRT9P35527 623 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 RABGGTBP53611 331 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 MFAP3P55082 362 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 SMYD5Q6GMV2 418 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 SPOPLQ6IQ16 392 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 GJB7Q6PEY0 223 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 FMNL3Q8IVF7 1028 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 TC2NQ8N9U0 490 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 JAKMIP2Q96AA8 810 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 DDX27Q96GQ7 796 aaKnown RBP23.59■■□□□ 1.37
EPCAM-202ENST00000405271 HPDLQ96IR7 371 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 SPAG5Q96R06 1193 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 GOLGA2P5Q9HBQ8 144 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 APOBEC3GQ9HC16 384 aaKnown RBP23.59■■□□□ 1.37
EPCAM-202ENST00000405271 UBE2TQ9NPD8 197 aaPredicted RBP23.59■■□□□ 1.37
EPCAM-202ENST00000405271 TBC1D13Q9NVG8 400 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 P4HA1P13674 534 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 JAM2P57087 298 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 RAPGEF1Q13905 1077 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 SCARA3Q6AZY7 606 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 PDXDC1Q6P996 788 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 PHOSPHO2Q8TCD6 241 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 TATDN2Q93075 761 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 TOP1MTQ969P6 601 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 CASD1Q96PB1 797 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 STK33Q9BYT3 514 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 ZNF576Q9H609 170 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 ABHD10Q9NUJ1 306 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 MSRAQ9UJ68 235 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 AJAP1Q9UKB5 411 aaPredicted RBP23.59■■□□□ 1.37
EPCAM-202ENST00000405271 NUB1Q9Y5A7 615 aa23.59■■□□□ 1.37
EPCAM-202ENST00000405271 VWA8A3KMH1 1905 aa23.58■■□□□ 1.37
EPCAM-202ENST00000405271 TAF6P49848 677 aa23.58■■□□□ 1.36
EPCAM-202ENST00000405271 ADKP55263 362 aaKnown RBP23.58■■□□□ 1.36
EPCAM-202ENST00000405271 DSC1Q08554 894 aa23.58■■□□□ 1.36
EPCAM-202ENST00000405271 CUL2Q13617 745 aa23.58■■□□□ 1.36
EPCAM-202ENST00000405271 RAB30Q15771 203 aa23.58■■□□□ 1.36
EPCAM-202ENST00000405271 SV2CQ496J9 727 aa23.58■■□□□ 1.36
EPCAM-202ENST00000405271 LRRC43Q8N309 656 aa23.58■■□□□ 1.36
EPCAM-202ENST00000405271 TMEM130Q8N3G9 435 aa23.58■■□□□ 1.36
EPCAM-202ENST00000405271 DNAJC7Q99615 494 aa23.58■■□□□ 1.36
EPCAM-202ENST00000405271 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.58■■□□□ 1.364e-8■■■■■ 159.8
EPCAM-202ENST00000405271 YBX2Q9Y2T7 364 aaKnown RBP23.58■■□□□ 1.36
EPCAM-202ENST00000405271 LRRC53A6NM62 1247 aa23.57■■□□□ 1.36
EPCAM-202ENST00000405271 RNF225M0QZC1 329 aaPredicted RBP23.57■■□□□ 1.36
EPCAM-202ENST00000405271 PODXLO00592 558 aa23.57■■□□□ 1.36
EPCAM-202ENST00000405271 DGKIO75912 1065 aa23.57■■□□□ 1.36
EPCAM-202ENST00000405271 PAX3P23760 479 aa23.57■■□□□ 1.36
EPCAM-202ENST00000405271 DEKP35659 375 aaKnown RBP23.57■■□□□ 1.36
EPCAM-202ENST00000405271 DEFB103AP81534 67 aa23.57■■□□□ 1.36
EPCAM-202ENST00000405271 RNASELQ05823 741 aaKnown RBP23.57■■□□□ 1.36
EPCAM-202ENST00000405271 RRAGAQ7L523 313 aa23.57■■□□□ 1.36
EPCAM-202ENST00000405271 OR8K1Q8NGG5 319 aa23.57■■□□□ 1.36
EPCAM-202ENST00000405271 FAM193BQ96PV7 902 aaPredicted RBP23.57■■□□□ 1.36
EPCAM-202ENST00000405271 PANX2Q96RD6 677 aa23.57■■□□□ 1.36
EPCAM-202ENST00000405271 SLC9A7Q96T83 725 aa23.57■■□□□ 1.36
EPCAM-202ENST00000405271 CDX2Q99626 313 aaPredicted RBP23.57■■□□□ 1.36
EPCAM-202ENST00000405271 FAM124BQ9H5Z6 455 aaPredicted RBP23.57■■□□□ 1.36
EPCAM-202ENST00000405271 EYSQ5T1H1 3165 aa23.57■■□□□ 1.36
EPCAM-202ENST00000405271 CHD7Q9P2D1 2997 aa23.56■■□□□ 1.36
EPCAM-202ENST00000405271 F8VZ95 297 aa23.56■■□□□ 1.36
EPCAM-202ENST00000405271 PPEF2O14830 753 aa23.56■■□□□ 1.36
EPCAM-202ENST00000405271 MYOGP15173 224 aa23.56■■□□□ 1.36
EPCAM-202ENST00000405271 TNNC1P63316 161 aa23.56■■□□□ 1.36
EPCAM-202ENST00000405271 DRAP1Q14919 205 aaPredicted RBP23.56■■□□□ 1.36
EPCAM-202ENST00000405271 TSR1Q2NL82 804 aaKnown RBP23.56■■□□□ 1.36
EPCAM-202ENST00000405271 WDR72Q3MJ13 1102 aa23.56■■□□□ 1.36
EPCAM-202ENST00000405271 SYN2Q92777 582 aaPredicted RBP23.56■■□□□ 1.36
EPCAM-202ENST00000405271 KREMEN1Q96MU8 473 aa23.56■■□□□ 1.36
EPCAM-202ENST00000405271 BCO2Q9BYV7 579 aa23.56■■□□□ 1.36
EPCAM-202ENST00000405271 STXBP5LQ9Y2K9 1186 aa23.56■■□□□ 1.36
EPCAM-202ENST00000405271 PCDHA11Q9Y5I1 949 aa23.56■■□□□ 1.36
EPCAM-202ENST00000405271 CASTOR2A6NHX0 329 aa23.55■■□□□ 1.36
EPCAM-202ENST00000405271 TBKBP1A7MCY6 615 aa23.55■■□□□ 1.36
EPCAM-202ENST00000405271 UPP2O95045 317 aa23.55■■□□□ 1.36
EPCAM-202ENST00000405271 STAT1P42224 750 aa23.55■■□□□ 1.36
EPCAM-202ENST00000405271 ASPAP45381 313 aa23.55■■□□□ 1.36
EPCAM-202ENST00000405271 CLCNKBP51801 687 aa23.55■■□□□ 1.36
EPCAM-202ENST00000405271 YWHAEP62258 255 aaKnown RBP23.55■■□□□ 1.36
EPCAM-202ENST00000405271 GOLGA8FQ08AF8 430 aa23.55■■□□□ 1.36
EPCAM-202ENST00000405271 GOLGA8DPQ0D2H9 430 aa23.55■■□□□ 1.36
EPCAM-202ENST00000405271 GRIN2CQ14957 1233 aa23.55■■□□□ 1.36
EPCAM-202ENST00000405271 UPP1Q16831 310 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms