RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 GJA8P48165 433 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 SCNN1GP51170 649 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 TNNC1P63316 161 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 SOX4Q06945 474 aaPredicted RBP3.97□□□□□ -1.77
RTN4-208ENST00000404909 TRAF7Q6Q0C0 670 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 SYT10Q6XYQ8 523 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 NOP9Q86U38 636 aaKnown RBP3.97□□□□□ -1.77
RTN4-208ENST00000404909 PALB2Q86YC2 1186 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 NT5DC4Q86YG4 428 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 RBBP8NLQ8NC74 664 aaPredicted RBP3.97□□□□□ -1.77
RTN4-208ENST00000404909 DBF4BQ8NFT6 615 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 EPS8L1Q8TE68 723 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 ARMC5Q96C12 935 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 FAM81BQ96LP2 452 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 AGPAT1Q99943 283 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 PACSIN1Q9BY11 444 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 CISHQ9NSE2 258 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 NAGPAQ9UK23 515 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 UBQLN1Q9UMX0 589 aaKnown RBP3.97□□□□□ -1.77
RTN4-208ENST00000404909 PAXBP1Q9Y5B6 917 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 SNX9Q9Y5X1 595 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 LAMA3Q16787 3333 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 CASTOR2A6NHX0 329 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 XPOTO43592 962 aaKnown RBP3.97□□□□□ -1.77
RTN4-208ENST00000404909 KRT86O43790 486 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 KIF5CO60282 957 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 NBNO60934 754 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 THP07101 528 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 MMEP08473 750 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 P4HA1P13674 534 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 CD19P15391 556 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 ACO1P21399 889 aaKnown RBP3.97□□□□□ -1.77
RTN4-208ENST00000404909 GNA15P30679 374 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 CYP2C18P33260 490 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 RAB27AP51159 221 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 VAV2P52735 878 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 FAAP100Q0VG06 881 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 BMS1Q14692 1282 aaKnown RBP3.97□□□□□ -1.77
RTN4-208ENST00000404909 ZNF569Q5MCW4 686 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 C9orf57Q5W0N0 161 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 AGMOQ6ZNB7 445 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 PASD1Q8IV76 773 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 CXorf38Q8TB03 319 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 LNX1Q8TBB1 728 aaPredicted RBP3.97□□□□□ -1.77
RTN4-208ENST00000404909 SEZ6LQ9BYH1 1024 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 RSAD1Q9HA92 442 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 LUC7LQ9NQ29 371 aaKnown RBP3.97□□□□□ -1.77
RTN4-208ENST00000404909 PRDM5Q9NQX1 630 aaPredicted RBP3.97□□□□□ -1.77
RTN4-208ENST00000404909 KCND1Q9NSA2 647 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 TMEM39AQ9NV64 488 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 TAS2R14Q9NYV8 317 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 DNAI1Q9UI46 699 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 DERAQ9Y315 318 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 TET1Q8NFU7 2136 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 PTGESO14684 152 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 THAP12O43422 761 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 BUB1O43683 1085 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 KCNE1P15382 129 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 ATF7P17544 494 aaPredicted RBP3.97□□□□□ -1.77
RTN4-208ENST00000404909 ATICP31939 592 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 ARHGAP25P42331 645 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 CDR1P51861 262 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 ZBTB6Q15916 424 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 NYAP1Q6ZVC0 841 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 SLC24A5Q71RS6 500 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 RTN4RL1Q86UN2 441 aaPredicted RBP3.97□□□□□ -1.77
RTN4-208ENST00000404909 TAF4BQ92750 862 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 C11orf49Q9H6J7 331 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 MIOSQ9NXC5 875 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 NOCTQ9UK39 431 aaKnown RBP3.97□□□□□ -1.77
RTN4-208ENST00000404909 SQORQ9Y6N5 450 aa3.97□□□□□ -1.77
RTN4-208ENST00000404909 PITPNM1O00562 1244 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 LCA5LO95447 670 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 FGFR1P11362 822 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 BPIFB4P59827 614 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 CDR2Q01850 454 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 DSC3Q14574 896 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 NAB2Q15742 525 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 PAN2Q504Q3 1202 aaKnown RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 ANKRD33Q7Z3H0 272 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 ECHDC2Q86YB7 292 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 GSTCDQ8NEC7 633 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 SLC30A5Q8TAD4 765 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 SEPT8Q92599 483 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 PGBD4Q96DM1 585 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 WDR24Q96S15 920 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 PCDHB18PQ96TA0 734 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 SDCBP2Q9H190 292 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 SLC38A7Q9NVC3 462 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 HMGXB4Q9UGU5 601 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 CHORDC1Q9UHD1 332 aaPredicted RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 GIT1Q9Y2X7 761 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 SCN1AP35498 2009 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 FRMPD3Q5JV73 1810 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 KPNA7A9QM74 516 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 SPTLC1O15269 473 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 ZNF623O75123 536 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 FTLP02792 175 aaPredicted RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 CFHP08603 1231 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 SKIP12755 728 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms