RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TLR3O15455 904 aaKnown RBP11.38□□□□□ -0.59
CLIP4-204ENST00000404424 CLTAP09496 248 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 KCNA2P16389 499 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 DSG3P32926 999 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 MAGEA4P43358 317 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 VPS41P49754 854 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 SLC18A1P54219 525 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 TAS2R40P59535 323 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 MPP2Q14168 576 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 SLFN12LQ6IEE8 588 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 SWSAP1Q6NVH7 229 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 GSTA5Q7RTV2 222 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 PNMA8AQ86V59 439 aaPredicted RBP11.38□□□□□ -0.59
CLIP4-204ENST00000404424 TDRPQ86YL5 185 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 SRRM1Q8IYB3 904 aaKnown RBP11.38□□□□□ -0.59
CLIP4-204ENST00000404424 GDAP1Q8TB36 358 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 FEZF2Q8TBJ5 459 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 RBM15Q96T37 977 aaKnown RBP eCLIP11.38□□□□□ -0.59
CLIP4-204ENST00000404424 POLR3FQ9H1D9 316 aaPredicted RBP11.38□□□□□ -0.59
CLIP4-204ENST00000404424 CXorf56Q9H5V9 222 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 IP6K2Q9UHH9 426 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 AGO2Q9UKV8 859 aaKnown RBP11.38□□□□□ -0.59
CLIP4-204ENST00000404424 PCDHB4Q9Y5E5 795 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 FAM47DPA6NHR8 397 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 RASA4BC9J798 803 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 WNT10BO00744 389 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 DNALI1O14645 258 aaPredicted RBP11.38□□□□□ -0.59
CLIP4-204ENST00000404424 RASA4O43374 803 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 PIGRP01833 764 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 CETPP11597 493 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 ALADP13716 330 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 MCL1Q07820 350 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 NFX1Q12986 1120 aaKnown RBP11.38□□□□□ -0.59
CLIP4-204ENST00000404424 BAATQ14032 418 aaPredicted RBP11.38□□□□□ -0.59
CLIP4-204ENST00000404424 ANKS1BQ7Z6G8 1248 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 PHLDB2Q86SQ0 1253 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 MAML1Q92585 1016 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 PPCSQ9HAB8 311 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 TBK1Q9UHD2 729 aa11.38□□□□□ -0.59
CLIP4-204ENST00000404424 SEPT9Q9UHD8 586 aaPredicted RBP11.38□□□□□ -0.59
CLIP4-204ENST00000404424 VWA5AO00534 786 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 TJP3O95049 919 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 VNN1O95497 513 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 GH1P01241 217 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 P3H1Q32P28 736 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 XKR3Q5GH77 459 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 LRRC38Q5VT99 294 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 LMBRD2Q68DH5 695 aaPredicted RBP11.37□□□□□ -0.59
CLIP4-204ENST00000404424 LLGL2Q6P1M3 1020 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 TMEM270Q6UE05 265 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 GPATCH11Q8N954 259 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 KLHL29Q96CT2 875 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 C9orf72Q96LT7 481 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 JPH1Q9HDC5 661 aaPredicted RBP11.37□□□□□ -0.59
CLIP4-204ENST00000404424 ARHGEF3Q9NR81 526 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 RNF146Q9NTX7 359 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 SENP1Q9P0U3 644 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 SLC9A2Q9UBY0 812 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 DRG1Q9Y295 367 aaKnown RBP11.37□□□□□ -0.59
CLIP4-204ENST00000404424 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.37□□□□□ -0.59
CLIP4-204ENST00000404424 MAGEB2O15479 319 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 LIASO43766 372 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 STAM2O75886 525 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 NLRP11P59045 1033 aaKnown RBP11.37□□□□□ -0.59
CLIP4-204ENST00000404424 PRKCEQ02156 737 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 E2F5Q15329 346 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 C2CD6Q53TS8 623 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 EAPPQ56P03 285 aaPredicted RBP11.37□□□□□ -0.59
CLIP4-204ENST00000404424 ABHD15Q6UXT9 468 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 FITM2Q8N6M3 262 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 TTLL6Q8N841 843 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 RBBP8NLQ8NC74 664 aaPredicted RBP11.37□□□□□ -0.59
CLIP4-204ENST00000404424 NSUN6Q8TEA1 469 aaKnown RBP11.37□□□□□ -0.59
CLIP4-204ENST00000404424 PWWP2AQ96N64 755 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 RPAP3Q9H6T3 665 aaPredicted RBP11.37□□□□□ -0.59
CLIP4-204ENST00000404424 EBF2Q9HAK2 575 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 APOBEC3GQ9HC16 384 aaKnown RBP11.37□□□□□ -0.59
CLIP4-204ENST00000404424 MLXIPLQ9NP71 852 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 ZNRF3Q9ULT6 936 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 ARID2Q68CP9 1835 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 WDR81Q562E7 1941 aa11.37□□□□□ -0.59
CLIP4-204ENST00000404424 EXOC1LA0A1B0GW35 172 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 PRPF4O43172 522 aaKnown RBP eCLIP11.36□□□□□ -0.59
CLIP4-204ENST00000404424 CALB1P05937 261 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 CD58P19256 250 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 TAC1P20366 129 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 ELF1P32519 619 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 PTPN7P35236 360 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 SSR1P43307 286 aaKnown RBP11.36□□□□□ -0.59
CLIP4-204ENST00000404424 KCNJ2P63252 427 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 TNFAIP1Q13829 316 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 TMEM63BQ5T3F8 832 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 DAB2IPQ5VWQ8 1189 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 SMYD5Q6GMV2 418 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 SPOPLQ6IQ16 392 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 MIS18BP1Q6P0N0 1132 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 ASRGL1Q7L266 308 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 TRABD2AQ86V40 505 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 PASD1Q8IV76 773 aa11.36□□□□□ -0.59
CLIP4-204ENST00000404424 CCDC60Q8IWA6 550 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms