RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 ZFP37Q9Y6Q3 630 aaPredicted RBP14.43□□□□□ -0.1
SDF4-203ENST00000403997 MUC6Q6W4X9 2439 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 ARHGEF37A1IGU5 675 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 PPEF2O14830 753 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 NARSO43776 548 aaKnown RBP14.42□□□□□ -0.1
SDF4-203ENST00000403997 PRPF6O94906 941 aaKnown RBP14.42□□□□□ -0.1
SDF4-203ENST00000403997 IL18RAPO95256 599 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 SEC24AO95486 1093 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 CPB1P15086 417 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 AARSP49588 968 aaKnown RBP eCLIP14.42□□□□□ -0.12e-7■■■■■ 46.4
SDF4-203ENST00000403997 VCPP55072 806 aaKnown RBP14.42□□□□□ -0.1
SDF4-203ENST00000403997 DNM1Q05193 864 aaKnown RBP14.42□□□□□ -0.1
SDF4-203ENST00000403997 ADCY1Q08828 1119 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 STXBP4Q6ZWJ1 553 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 TCEAL8Q8IYN2 117 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 ST13P5Q8NFI4 369 aaPredicted RBP14.42□□□□□ -0.1
SDF4-203ENST00000403997 NOC3LQ8WTT2 800 aaKnown RBP14.42□□□□□ -0.1
SDF4-203ENST00000403997 FGF13Q92913 245 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 SAAL1Q96ER3 474 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 SENP8Q96LD8 212 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 TMEM206Q9H813 350 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 DPP3Q9NY33 737 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 FAM13BQ9NYF5 915 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 AFF4Q9UHB7 1163 aaKnown RBP14.42□□□□□ -0.1
SDF4-203ENST00000403997 PCDHA7Q9UN72 937 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 C2CD2Q9Y426 696 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 PDCD11Q14690 1871 aaKnown RBP14.42□□□□□ -0.1
SDF4-203ENST00000403997 DOCK8Q8NF50 2099 aa14.42□□□□□ -0.1
SDF4-203ENST00000403997 ZNF318Q5VUA4 2279 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 ANO9A1A5B4 782 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 GOLGA8IPA6NC78 632 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 GOLGA8JA6NMD2 632 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 ANHXE9PGG2 379 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 PIRO00625 290 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 POLR2DO15514 142 aaKnown RBP14.41□□□□□ -0.1
SDF4-203ENST00000403997 RHOP08100 348 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 PTPN2P17706 415 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 TYMPP19971 482 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 GARTP22102 1010 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 PAX3P23760 479 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 ASIC1P78348 528 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 OVOS1Q6IE37 1185 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 RNF19BQ6ZMZ0 732 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 HPS3Q969F9 1004 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 PRRX2Q99811 253 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 OXCT2Q9BYC2 517 aaPredicted RBP14.41□□□□□ -0.1
SDF4-203ENST00000403997 TRIM9Q9C026 710 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 PCIF1Q9H4Z3 704 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 KCNH3Q9ULD8 1083 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 MAFFQ9ULX9 164 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 MRPS23Q9Y3D9 190 aaKnown RBP14.41□□□□□ -0.1
SDF4-203ENST00000403997 INSL5Q9Y5Q6 135 aa14.41□□□□□ -0.1
SDF4-203ENST00000403997 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.4□□□□□ -0.1
SDF4-203ENST00000403997 OR6C75A6NL08 312 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 SPTLC1O15269 473 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 LDHAP00338 332 aaKnown RBP14.4□□□□□ -0.1
SDF4-203ENST00000403997 CFHP08603 1231 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 OR4Q2P0C623 313 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 ODC1P11926 461 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 HTR4Q13639 388 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 ARMCX5Q6P1M9 558 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 PARM1Q6UWI2 310 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 EFCAB13Q8IY85 973 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 ELMOD1Q8N336 334 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 ZSWIM2Q8NEG5 633 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 FLCNQ8NFG4 579 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 ING5Q8WYH8 240 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 PGLYRP2Q96PD5 576 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 C7orf25Q9BPX7 421 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 CORO1BQ9BR76 489 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 CBWD1Q9BRT8 395 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 RCOR1Q9UKL0 485 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 NUMBLQ9Y6R0 609 aa14.4□□□□□ -0.1
SDF4-203ENST00000403997 STK25O00506 426 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 CYB561D2O14569 222 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 EXTL3O43909 919 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 SRFP11831 508 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 TAF6P49848 677 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 MRE11P49959 708 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 TFAMQ00059 246 aaKnown RBP14.39□□□□□ -0.11
SDF4-203ENST00000403997 NHLH1Q02575 133 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 TWF1Q12792 350 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 RESP18Q5W5W9 173 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 ASTLQ6HA08 431 aaPredicted RBP14.39□□□□□ -0.11
SDF4-203ENST00000403997 IQCEQ6IPM2 695 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 CNNM4Q6P4Q7 775 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 MTSS1LQ765P7 747 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 METTL23Q86XA0 190 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 NT5DC4Q86YG4 428 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 BRSK2Q8IWQ3 736 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 SIX5Q8N196 739 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 GLIS3Q8NEA6 775 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 CACTINQ8WUQ7 758 aaKnown RBP14.39□□□□□ -0.11
SDF4-203ENST00000403997 MCRS1Q96EZ8 462 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 ZNF512Q96ME7 567 aaPredicted RBP14.39□□□□□ -0.11
SDF4-203ENST00000403997 PYM1Q9BRP8 204 aaKnown RBP14.39□□□□□ -0.11
SDF4-203ENST00000403997 RPP25Q9BUL9 199 aaKnown RBP14.39□□□□□ -0.11
SDF4-203ENST00000403997 MAGEF1Q9HAY2 307 aa14.39□□□□□ -0.11
SDF4-203ENST00000403997 RBAKQ9NYW8 714 aaPredicted RBP14.39□□□□□ -0.11
SDF4-203ENST00000403997 WNT16Q9UBV4 365 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms