RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 SIP14410 1827 aa25.08■■□□□ 1.61
TRIOBP-203ENST00000403663 LRRIQ4A6NIV6 560 aa25.08■■□□□ 1.61
TRIOBP-203ENST00000403663 NUDT17P0C025 328 aa25.08■■□□□ 1.61
TRIOBP-203ENST00000403663 ZNF268Q14587 947 aaPredicted RBP25.08■■□□□ 1.61
TRIOBP-203ENST00000403663 GRIK4Q16099 956 aa25.08■■□□□ 1.61
TRIOBP-203ENST00000403663 TRPM8Q7Z2W7 1104 aa25.08■■□□□ 1.61
TRIOBP-203ENST00000403663 PGM2Q96G03 612 aa25.08■■□□□ 1.61
TRIOBP-203ENST00000403663 TRIM31Q9BZY9 425 aa25.08■■□□□ 1.61
TRIOBP-203ENST00000403663 ARHGAP28Q9P2N2 729 aa25.08■■□□□ 1.61
TRIOBP-203ENST00000403663 TBX20Q9UMR3 447 aa25.08■■□□□ 1.61
TRIOBP-203ENST00000403663 TRIM17Q9Y577 477 aa25.08■■□□□ 1.61
TRIOBP-203ENST00000403663 UBE4BO95155 1302 aa25.08■■□□□ 1.6
TRIOBP-203ENST00000403663 GJA9P57773 515 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 MAP2K1Q02750 393 aaPredicted RBP25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 ADAM9Q13443 819 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 EDRF1Q3B7T1 1238 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 GNASQ5JWF2 1037 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 STXBP4Q6ZWJ1 553 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 ZC3H3Q8IXZ2 948 aaKnown RBP25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 SYCP3Q8IZU3 236 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 SELENOSQ9BQE4 189 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 AGAP1Q9UPQ3 857 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 PPME1Q9Y570 386 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 NR3C1P04150 777 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 CASP4P49662 377 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 CCNHP51946 323 aaPredicted RBP25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 IRX1P78414 480 aaPredicted RBP25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 PURAQ00577 322 aaKnown RBP25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 MFSD10Q14728 455 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 FAM133BQ5BKY9 247 aaKnown RBP25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 AGPAT3Q9NRZ7 376 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 SAMD15Q9P1V8 674 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 PTCH2Q9Y6C5 1203 aa25.07■■□□□ 1.6
TRIOBP-203ENST00000403663 GNRH1P01148 92 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 RARBP10826 455 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 ACTN1P12814 892 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 LAMTOR4Q0VGL1 99 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 GRIK3Q13003 919 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 DPY19L2P1Q6NXN4 242 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 NT5DC3Q86UY8 548 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 AGAP11Q8TF27 550 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 LMBR1Q8WVP7 490 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 PPP1R16BQ96T49 567 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 ELAC2Q9BQ52 826 aaKnown RBP25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 BZW2Q9Y6E2 419 aaKnown RBP25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 EDN1P05305 212 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 SRGAP2CP0DJJ0 459 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 SMIM10L2AP0DMW4 78 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 SMIM10L2BP0DMW5 78 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 ALADP13716 330 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 ZKSCAN8Q15776 578 aaPredicted RBP25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 IER5Q5VY09 327 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 MTHFD1LQ6UB35 978 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 PPP4R3CPQ6ZMV5 832 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 RHPN2Q8IUC4 686 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 ZSWIM2Q8NEG5 633 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 ACCSQ96QU6 501 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 ZDHHC18Q9NUE0 388 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 NENFQ9UMX5 172 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 NR2E1Q9Y466 385 aa25.06■■□□□ 1.6
TRIOBP-203ENST00000403663 ANKRD63C9JTQ0 380 aa25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 CALUO43852 315 aaPredicted RBP25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 ADAMTS4O75173 837 aa25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 INHAP05111 366 aa25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 NAMPTP43490 491 aa25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 PSEN2P49810 448 aa25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 KCNH2Q12809 1159 aa25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 BZW1Q7L1Q6 419 aaKnown RBP25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 LINC01465Q8N7H1 131 aa25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 PXYLP1Q8TE99 480 aa25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 HES6Q96HZ4 224 aa25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 BEGAINQ9BUH8 593 aa25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 UPF3AQ9H1J1 476 aaKnown RBP25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 CCDC134Q9H6E4 229 aa25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 XPNPEP3Q9NQH7 507 aa25.05■■□□□ 1.6
TRIOBP-203ENST00000403663 HAS3O00219 553 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 ALCAMQ13740 583 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 CXCL17Q6UXB2 119 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 MAP4K3Q8IVH8 894 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 PSPC1Q8WXF1 523 aaKnown RBP25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 RAB17Q9H0T7 212 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 PABPC3Q9H361 631 aaKnown RBP25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 ABCF3Q9NUQ8 709 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 WBP1LQ9NX94 342 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 SCN10AQ9Y5Y9 1956 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 AKAP3O75969 853 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 BRDTQ58F21 947 aaPredicted RBP25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 SLC39A4Q6P5W5 647 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 DAAM2Q86T65 1068 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 DEPTORQ8TB45 409 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 SPAG5Q96R06 1193 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 PRMT1Q99873 361 aaKnown RBP25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 CBWD1Q9BRT8 395 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 INTS9Q9NV88 658 aaKnown RBP25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 TTC7AQ9ULT0 858 aaPredicted RBP25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 COL1A2P08123 1366 aa25.04■■□□□ 1.6
TRIOBP-203ENST00000403663 FGGP02679 453 aa25.03■■□□□ 1.6
TRIOBP-203ENST00000403663 UCHL3P15374 230 aa25.03■■□□□ 1.6
TRIOBP-203ENST00000403663 CYP2J2P51589 502 aa25.03■■□□□ 1.6
TRIOBP-203ENST00000403663 C11orf91Q3C1V1 193 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms