RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	MBTPS2	O43462	519 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	PPM1B	O75688	479 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	MMP1	P03956	469 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	SRGAP2B	P0DMP2	458 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	GHR	P10912	638 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ICAM3	P32942	547 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	TRDN	Q13061	729 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	SERINC3	Q13530	473 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	UTP14C	Q5TAP6	766 aa	Known RBP	7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	MRM1	Q6IN84	353 aa	Known RBP	7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	XRRA1	Q6P2D8	792 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ADAT2	Q7Z6V5	191 aa	Known RBP	7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	NLRX1	Q86UT6	975 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	SMARCC2	Q8TAQ2	1214 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	LMBR1	Q8WVP7	490 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	EDA	Q92838	391 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	CDHR1	Q96JP9	859 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	SNX27	Q96L92	541 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	GPR20	Q99678	358 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	TANC1	Q9C0D5	1861 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	MYH4	Q9Y623	1939 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	MCM3AP	O60318	1980 aa		7.71	□□□□□ -1.17
CEACAM1-208	ENST00000403461	COL4A6	Q14031	1691 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	TMEM221	A6NGB7	291 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461		M0R296	226 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	ESR1	P03372	595 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	STAG3L1	P0CL83	205 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	SDS	P20132	328 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	SP2	Q02086	613 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	SP4	Q02446	784 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	HYAL1	Q12794	435 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	PPFIA1	Q13136	1202 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	SART3	Q15020	963 aa	Known RBP	7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	CWC27	Q6UX04	472 aa	Known RBP	7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	TSHZ1	Q6ZSZ6	1077 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	BMP8A	Q7Z5Y6	402 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	CREG2	Q8IUH2	290 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	BRF1	Q92994	677 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	TCTN2	Q96GX1	697 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	INPP4A	Q96PE3	977 aa	Predicted RBP	7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	DSCC1	Q9BVC3	393 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	FTHL17	Q9BXU8	183 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	MSRB2	Q9Y3D2	182 aa		7.71	□□□□□ -1.18
CEACAM1-208	ENST00000403461	COL4A4	P53420	1690 aa	Predicted RBP	7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	MYH7	P12883	1935 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	TCF20	Q9UGU0	1960 aa	Known RBP	7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	SUSD5	O60279	629 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	TBX10	O75333	385 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	GSN	P06396	782 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	LTBR	P36941	435 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	COASY	Q13057	564 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	HDAC1	Q13547	482 aa	Predicted RBP	7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	FAM43B	Q6ZT52	329 aa	Predicted RBP	7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	RALYL	Q86SE5	291 aa	Known RBP	7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	CMTR2	Q8IYT2	770 aa	Known RBP	7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	EFHB	Q8N7U6	833 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	AGBL5	Q8NDL9	886 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	IL31RA	Q8NI17	732 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	GLG1	Q92896	1179 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	P2RX5	Q93086	422 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	MTMR8	Q96EF0	704 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	RCC1L	Q96I51	464 aa	Known RBP	7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	PIGS	Q96S52	555 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	SENP7	Q9BQF6	1050 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	CCDC113	Q9H0I3	377 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	EPN3	Q9H201	632 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	ALG13	Q9NP73	1137 aa	Known RBP	7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	ERAP1	Q9NZ08	941 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	RTEL1	Q9NZ71	1219 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	SEC63	Q9UGP8	760 aa	Known RBP	7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	TUBE1	Q9UJT0	475 aa		7.7	□□□□□ -1.18
CEACAM1-208	ENST00000403461	MEIS1	O00470	390 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	ENPP3	O14638	875 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	PPP1R11	O60927	126 aa	Predicted RBP	7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	DGKI	O75912	1065 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	EYA4	O95677	639 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	CHRNA1	P02708	482 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	HMGB1	P09429	215 aa	Known RBP	7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	FUT4	P22083	530 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	CTSK	P43235	329 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	NRIP1	P48552	1158 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	MRPS6	P82932	125 aa	Known RBP	7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	ZXDA	P98168	799 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	DLX2	Q07687	328 aa	Predicted RBP	7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	SIGLEC14	Q08ET2	396 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	ADAM15	Q13444	863 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	LPIN1	Q14693	890 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	GRM4	Q14833	912 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	SPOUT1	Q5T280	376 aa	Known RBP	7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	CATIP	Q7Z7H3	387 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	TP53INP2	Q8IXH6	220 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	ARHGEF39	Q8N4T4	335 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	ZNF513	Q8N8E2	541 aa	Predicted RBP	7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	SMRP1	Q8NCR6	262 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	PRSS33	Q8NF86	280 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	ZNF689	Q96CS4	500 aa	Predicted RBP	7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	CDCA3	Q99618	268 aa	Predicted RBP	7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	LNPK	Q9C0E8	428 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	SMARCAD1	Q9H4L7	1026 aa		7.69	□□□□□ -1.18
CEACAM1-208	ENST00000403461	NOL6	Q9H6R4	1146 aa	Known RBP	7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms