RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

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Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 OR2W6PQ8NHA6 318 aa17.02■□□□□ 0.32
CHRFAM7A-203ENST00000401522 PPP1R13LQ8WUF5 828 aa17.02■□□□□ 0.32
CHRFAM7A-203ENST00000401522 SLC20A1Q8WUM9 679 aa17.02■□□□□ 0.32
CHRFAM7A-203ENST00000401522 RPS6KC1Q96S38 1066 aa17.02■□□□□ 0.32
CHRFAM7A-203ENST00000401522 ERP44Q9BS26 406 aa17.02■□□□□ 0.32
CHRFAM7A-203ENST00000401522 TXLNGYQ9BZA5 131 aa17.02■□□□□ 0.32
CHRFAM7A-203ENST00000401522 DPH5Q9H2P9 285 aa17.02■□□□□ 0.32
CHRFAM7A-203ENST00000401522 FAM107AO95990 144 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 FTLP02792 175 aaPredicted RBP17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 GBP1P32455 592 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 GPC5P78333 572 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 DLG4P78352 724 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PPP3CAQ08209 521 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PACS2Q86VP3 889 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ARHGEF19Q8IW93 802 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 LINC01465Q8N7H1 131 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 MYCBPAPQ8TBZ2 947 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 CCT8L2Q96SF2 557 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 TRIM51Q9BSJ1 452 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PCIF1Q9H4Z3 704 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 HSPBP1Q9NZL4 362 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 CTTNBP2NLQ9P2B4 639 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 NR2E1Q9Y466 385 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ALG6Q9Y672 507 aa17.02■□□□□ 0.31
CHRFAM7A-203ENST00000401522 KAT6AQ92794 2004 aa17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 RTN2O75298 545 aa17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 MTA2O94776 668 aa17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 RTP1P59025 263 aa17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 MCCD1P59942 119 aaPredicted RBP17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 GTF2BQ00403 316 aa17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 EFCAB12Q6NXP0 572 aa17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 MAEAQ7L5Y9 396 aa17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 YTHDF3Q7Z739 585 aaKnown RBP17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 RPUSD2Q8IZ73 545 aaKnown RBP17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 MICALL1Q8N3F8 863 aa17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ALG3Q92685 438 aa17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 KIFAP3Q92845 792 aa17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 SLC12A6Q9UHW9 1150 aa17.01■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PHF2O75151 1096 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 COL6A1P12109 1028 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 GZMAP12544 262 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 CHRNA3P32297 505 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ARL2P36404 184 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 GCLMP48507 274 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PPP2R2AP63151 447 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 C1orf220Q5T0J3 134 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 FAM102BQ5T8I3 360 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 IER5Q5VY09 327 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 TCP11Q8WWU5 503 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ZBTB10Q96DT7 871 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ZSWIM1Q9BR11 485 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 CBWD1Q9BRT8 395 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 C17orf75Q9HAS0 396 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 GPRC5CQ9NQ84 441 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ZDHHC18Q9NUE0 388 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 MYH11P35749 1972 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 MEFVO15553 781 aaPredicted RBP17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 TREHO43280 583 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 TMOD1P28289 359 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 MXI1P50539 228 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 SOX10P56693 466 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ZNF211Q13398 564 aaPredicted RBP17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 FAM47CQ5HY64 1035 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 GDF6Q6KF10 455 aaPredicted RBP17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 HAUS6Q7Z4H7 955 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 HOOK3Q86VS8 718 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 JAMLQ86YT9 394 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 FAM71AQ8IYT1 594 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 TMEM143Q96AN5 459 aa17■□□□□ 0.31
CHRFAM7A-203ENST00000401522 SMIM35A0A1B0GVV1 85 aa16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ARVCFO00192 962 aa16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PAEPP09466 180 aa16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 LIG3P49916 1009 aa16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 CDK7P50613 346 aa16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ZNF200P98182 395 aaPredicted RBP16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 IFFO1Q0D2I5 559 aa16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 DRP2Q13474 957 aa16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 KRT71Q3SY84 523 aa16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ODF2Q5BJF6 829 aa16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 LRRC71Q8N4P6 559 aa16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 OTUD6BQ8N6M0 293 aa16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 TRIM31Q9BZY9 425 aa16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 SENP6Q9GZR1 1112 aaPredicted RBP16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 WNT8AQ9H1J5 351 aa16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 ERVK-5Q9HDB9 667 aa16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 BCCIPQ9P287 314 aaKnown RBP eCLIP16.99■□□□□ 0.31
CHRFAM7A-203ENST00000401522 TISP43B9A030 160 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 E7EVH7 732 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 NUDT17P0C025 328 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 CTNNA2P26232 953 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 CDR1P51861 262 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 SEC24CP53992 1094 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 NCKAP1LP55160 1127 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 KIAA0319LQ8IZA0 1049 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 PRPF31Q8WWY3 499 aaKnown RBP16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 RUNDC3BQ96NL0 473 aa16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 NTPCRQ9BSD7 190 aaKnown RBP16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 POLR3FQ9H1D9 316 aaPredicted RBP16.98■□□□□ 0.31
CHRFAM7A-203ENST00000401522 CNOT10Q9H9A5 744 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 1122.6 ms