RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 LDHBP07195 334 aaKnown RBP8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 HSMCR30P0CW71 290 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 LSP1P33241 339 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 RAP1GAPP47736 663 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 HDLBPQ00341 1268 aaKnown RBP8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 PSMD5Q16401 504 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 ALG11Q2TAA5 492 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 CHID1Q9BWS9 393 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 MECP2P51608 486 aaKnown RBP8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 TAF13Q15543 124 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 SCAIQ8N9R8 606 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 ZNF671Q8TAW3 534 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 TAB2Q9NYJ8 693 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 RAB23Q9ULC3 237 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 DDX39AO00148 427 aaKnown RBP8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 CCNG2Q16589 344 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 KSR1Q8IVT5 923 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 ZBTB38Q8NAP3 1195 aaPredicted RBP8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 SMG5Q9UPR3 1016 aaKnown RBP8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 NDUFA10O95299 355 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 KCNK10P57789 538 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 UBP1Q9NZI7 540 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 AIPO00170 330 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 PEX5P50542 639 aa8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 EIF3MQ7L2H7 374 aaKnown RBP8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 NET1Q7Z628 596 aaPredicted RBP8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 NOL6Q9H6R4 1146 aaKnown RBP8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 IQSEC3Q9UPP2 1182 aaPredicted RBP8.96□□□□□ -0.98
CACNA1C-220ENST00000399655 MYH3P11055 1940 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 CDC25BP30305 580 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 CYP2J2P51589 502 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 RIMBP2O15034 1052 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 XRCC4Q13426 336 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 PICALMQ13492 652 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 ALCAMQ13740 583 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 C2orf76Q3KRA6 126 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 ANKLE2Q86XL3 938 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 GPALPP1Q8IXQ4 340 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 YIPF2Q9BWQ6 316 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 TRIT1Q9H3H1 467 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 COPRSQ9NQ92 184 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 MYH8P13535 1937 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 BTBD19C9JJ37 291 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 SLC33A1O00400 549 aaPredicted RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 PABPC1P11940 636 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 PSMC5P62195 406 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 CACHD1Q5VU97 1274 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 PROSER1Q86XN7 944 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 TEX19Q8NA77 164 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 NUDT12Q9BQG2 462 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 PUS7LQ9H0K6 701 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 PNO1Q9NRX1 252 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 RB1CC1Q8TDY2 1594 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 SERPING1P05155 500 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 PDHA2P29803 388 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 RAD23AP54725 363 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 MESDQ14696 234 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 KRT24Q2M2I5 525 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 PRMT9Q6P2P2 845 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 PI4K2AQ9BTU6 479 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 NEUROD4Q9HD90 331 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 TBC1D14Q9P2M4 693 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 KITP10721 976 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 SNX17Q15036 470 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 HIST2H2ACQ16777 129 aaPredicted RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 ADAT2Q7Z6V5 191 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 EEF1AKMT1Q8WVE0 214 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 APPBP2Q92624 585 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 EPN1Q9Y6I3 576 aaPredicted RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 FAM102BQ5T8I3 360 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 VN1R5Q7Z5H4 357 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 WDR12Q9GZL7 423 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 GGNBP2Q9H3C7 697 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 PAG1Q9NWQ8 432 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 KPNA3O00505 521 aaPredicted RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 IKBKBO14920 756 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 MYL12BO14950 172 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 PSIP1O75475 530 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 PPP2R2AP63151 447 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 MARK3P27448 753 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 ADSLP30566 484 aaPredicted RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 DGKHQ86XP1 1220 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 SUN5Q8TC36 379 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 EPB41L4BQ9H329 900 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 SLITRK6Q9H5Y7 841 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 NDFIP2Q9NV92 336 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 DOLKQ9UPQ8 538 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 K7ERI5 159 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 VILLO15195 856 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 AHCYL1O43865 530 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 SLC1A4P43007 532 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 NFIAQ12857 509 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 RWDD4Q6NW29 188 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 CCDC8Q9H0W5 538 aaPredicted RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 STK25O00506 426 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 DLATP10515 647 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 EIF5AL1Q6IS14 154 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 KCNV2Q8TDN2 545 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 SKA1Q96BD8 255 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms