RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 DSG3P32926 999 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 LMNB2Q03252 620 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 MKRN3Q13064 507 aaKnown RBP13.9□□□□□ -0.18
PRAME-201ENST00000398741 TNFAIP1Q13829 316 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 PREPLQ4J6C6 727 aaPredicted RBP13.9□□□□□ -0.18
PRAME-201ENST00000398741 DALRD3Q5D0E6 543 aaKnown RBP13.9□□□□□ -0.18
PRAME-201ENST00000398741 SNRNP48Q6IEG0 339 aaKnown RBP13.9□□□□□ -0.18
PRAME-201ENST00000398741 PPP1R2P3Q6NXS1 205 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 SPATA21Q7Z572 469 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 TBC1D1Q86TI0 1168 aaPredicted RBP13.9□□□□□ -0.18
PRAME-201ENST00000398741 SRRM1Q8IYB3 904 aaKnown RBP13.9□□□□□ -0.18
PRAME-201ENST00000398741 GBP7Q8N8V2 638 aaPredicted RBP13.9□□□□□ -0.18
PRAME-201ENST00000398741 NSUN6Q8TEA1 469 aaKnown RBP13.9□□□□□ -0.18
PRAME-201ENST00000398741 TCP11Q8WWU5 503 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 CDHR1Q96JP9 859 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 C9orf72Q96LT7 481 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 TGS1Q96RS0 853 aaKnown RBP13.9□□□□□ -0.18
PRAME-201ENST00000398741 GINM1Q9NU53 330 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 RBAKQ9NYW8 714 aaPredicted RBP13.9□□□□□ -0.18
PRAME-201ENST00000398741 BAIAP2L1Q9UHR4 511 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 LGALS13Q9UHV8 139 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 GGT7Q9UJ14 662 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 NEU2Q9Y3R4 380 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 UBOX5O94941 541 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 ATP6V1G2O95670 118 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 CFHP08603 1231 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 ACTR2P61160 394 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 EMC2Q15006 297 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 ZKSCAN8Q15776 578 aaPredicted RBP13.9□□□□□ -0.18
PRAME-201ENST00000398741 P3H1Q32P28 736 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 XKR3Q5GH77 459 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 MIS18BP1Q6P0N0 1132 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 PPP1R21Q6ZMI0 780 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 PNMA8AQ86V59 439 aaPredicted RBP13.9□□□□□ -0.18
PRAME-201ENST00000398741 FAM228AQ86W67 206 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 RBBP8NLQ8NC74 664 aaPredicted RBP13.9□□□□□ -0.18
PRAME-201ENST00000398741 CCHCR1Q8TD31 782 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 WNK4Q96J92 1243 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 MYCBPQ99417 103 aaPredicted RBP13.9□□□□□ -0.18
PRAME-201ENST00000398741 PARVAQ9NVD7 372 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 NAALADL1Q9UQQ1 740 aa13.9□□□□□ -0.18
PRAME-201ENST00000398741 VNN1O95497 513 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 GH1P01241 217 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 CLTAP09496 248 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 TBXAS1P24557 533 aaPredicted RBP13.89□□□□□ -0.19
PRAME-201ENST00000398741 WNT7BP56706 349 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 GSCP56915 257 aaPredicted RBP13.89□□□□□ -0.19
PRAME-201ENST00000398741 C1QBPQ07021 282 aaKnown RBP13.89□□□□□ -0.19
PRAME-201ENST00000398741 PDE4CQ08493 712 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 ADCY1Q08828 1119 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 KAZNQ674X7 775 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 SLFN12LQ6IEE8 588 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 PLEKHA7Q6IQ23 1121 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 CYP4F22Q6NT55 531 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 PHF13Q86YI8 300 aaPredicted RBP13.89□□□□□ -0.19
PRAME-201ENST00000398741 CYP4X1Q8N118 509 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 NLGN2Q8NFZ4 835 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 GIMAP7Q8NHV1 300 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 DEPTORQ8TB45 409 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 FEZF2Q8TBJ5 459 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 RBM41Q96IZ5 413 aaKnown RBP13.89□□□□□ -0.19
PRAME-201ENST00000398741 RBM15Q96T37 977 aaKnown RBP eCLIP13.89□□□□□ -0.194e-15■■■□□ 14.6
PRAME-201ENST00000398741 TACO1Q9BSH4 297 aaKnown RBP13.89□□□□□ -0.19
PRAME-201ENST00000398741 FOXP3Q9BZS1 431 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 ECT2Q9H8V3 914 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 ANKFY1Q9P2R3 1169 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 IP6K2Q9UHH9 426 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 ARL2BPQ9Y2Y0 163 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 TELO2Q9Y4R8 837 aa13.89□□□□□ -0.19
PRAME-201ENST00000398741 LRRIQ4A6NIV6 560 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 LDHAP00338 332 aaKnown RBP13.88□□□□□ -0.19
PRAME-201ENST00000398741 CETPP11597 493 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 MAGEA4P43358 317 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 CXCL9Q07325 125 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 NFX1Q12986 1120 aaKnown RBP13.88□□□□□ -0.19
PRAME-201ENST00000398741 NEDD9Q14511 834 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 TMED2Q15363 201 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 GNPTABQ3T906 1256 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 WLSQ5T9L3 541 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 RELL1Q8IUW5 271 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 ANKRD35Q8N283 1001 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 RIBC1Q8N443 379 aaPredicted RBP13.88□□□□□ -0.19
PRAME-201ENST00000398741 ZCCHC9Q8N567 271 aaKnown RBP13.88□□□□□ -0.19
PRAME-201ENST00000398741 TMEM143Q96AN5 459 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 MAGEB18Q96M61 343 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 CFAP57Q96MR6 1250 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 MSTO1Q9BUK6 570 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 APOBEC3GQ9HC16 384 aaKnown RBP13.88□□□□□ -0.19
PRAME-201ENST00000398741 NOD2Q9HC29 1040 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 KLHL11Q9NVR0 708 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 AGAP1Q9UPQ3 857 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 ACTL7BQ9Y614 415 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 NFASCO94856 1347 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 PTPRJQ12913 1337 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 RASA4BC9J798 803 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 RASA4O43374 803 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 RGS20O76081 388 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 KRT1P04264 644 aa13.88□□□□□ -0.19
PRAME-201ENST00000398741 ATF7P17544 494 aaPredicted RBP13.88□□□□□ -0.19
PRAME-201ENST00000398741 IBSPP21815 317 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms