RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 BLOC1S4Q9NUP1 217 aa10.76□□□□□ -0.69
HMGCLL1-205ENST00000398661 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.76□□□□□ -0.69
HMGCLL1-205ENST00000398661 TBC1D7Q9P0N9 293 aa10.76□□□□□ -0.69
HMGCLL1-205ENST00000398661 KIAA1024Q9UPX6 916 aa10.76□□□□□ -0.69
HMGCLL1-205ENST00000398661 MCM3APO60318 1980 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 PFASO15067 1338 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 PIK3CDO00329 1044 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 MAPK13O15264 365 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 BRAFP15056 766 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 TAC1P20366 129 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 RASSF2P50749 326 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 GRB10Q13322 594 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 DBN1Q16643 649 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 ZC2HC1CQ53FD0 456 aaPredicted RBP10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 ZNF449Q6P9G9 518 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 ANKRD23Q86SG2 305 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 MYLK4Q86YV6 388 aaPredicted RBP10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 MYOCDQ8IZQ8 938 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 C18orf8Q96DM3 657 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 CEP63Q96MT8 703 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 PNMA5Q96PV4 448 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 PXMP2Q9NR77 195 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 USH1CQ9Y6N9 552 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 FOXO6A8MYZ6 492 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 CXCL11O14625 94 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 AOC2O75106 756 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 ECEL1O95672 775 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 ACTN1P12814 892 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 MARK3P27448 753 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 HOXA7P31268 230 aaPredicted RBP10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 FOXN2P32314 431 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 SP2Q02086 613 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 ZNF211Q13398 564 aaPredicted RBP10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 ARHGEF18Q6ZSZ5 1173 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 FAM47EQ6ZV65 393 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 PDCD2LQ9BRP1 358 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 ZNF577Q9BSK1 485 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 CARD9Q9H257 536 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 INTUQ9ULD6 942 aa10.75□□□□□ -0.69
HMGCLL1-205ENST00000398661 SFI1A8K8P3 1242 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 IPO5O00410 1097 aaKnown RBP10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 PODXLO00592 558 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 TRAFD1O14545 582 aaPredicted RBP10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 PHF2O75151 1096 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 GNA14O95837 355 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 CYP1A1P04798 512 aaPredicted RBP10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 NR3C2P08235 984 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 ABCD1P33897 745 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 PRKCIP41743 596 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 SPIRE1Q08AE8 756 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 STRN3Q13033 797 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 PABPC4Q13310 644 aaKnown RBP eCLIP10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 AP3B2Q13367 1082 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 GIT2Q14161 759 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 RCN1Q15293 331 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 LRRC74BQ6ZQY2 392 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 TRMT10CQ7L0Y3 403 aaKnown RBP10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 CCDC25Q86WR0 208 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 CATSPER3Q86XQ3 398 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 TPH2Q8IWU9 490 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 LARP4BQ92615 738 aaKnown RBP10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 SPATA16Q9BXB7 569 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 NT5C3AQ9H0P0 336 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 TLE6Q9H808 572 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 ACAD9Q9H845 621 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 NKIRAS1Q9NYS0 192 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 STK17AQ9UEE5 414 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 PARP14Q460N5 1801 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 DCTN3O75935 186 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 ANXA13P27216 316 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 MARSP56192 900 aaKnown RBP10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 SFSWAPQ12872 951 aaKnown RBP10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 LSAMPQ13449 338 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 MTMR1Q13613 665 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 KPNB1Q14974 876 aaKnown RBP10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 CLUL1Q15846 466 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 RFWD3Q6PCD5 774 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 C4orf50Q6ZRC1 276 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 U2AF1L4Q8WU68 220 aaKnown RBP10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 ART4Q93070 314 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 TMEM165Q9HC07 324 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 OSGEPQ9NPF4 335 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 GINM1Q9NU53 330 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 ZNF232Q9UNY5 417 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 STARD13Q9Y3M8 1113 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 PCDHA3Q9Y5H8 950 aa10.74□□□□□ -0.69
HMGCLL1-205ENST00000398661 DOCK5Q9H7D0 1870 aa10.73□□□□□ -0.69
HMGCLL1-205ENST00000398661 CBX6O95503 412 aa10.73□□□□□ -0.69
HMGCLL1-205ENST00000398661 UBTFL6P0CB48 400 aaPredicted RBP10.73□□□□□ -0.69
HMGCLL1-205ENST00000398661 FAM200BP0CF97 657 aa10.73□□□□□ -0.69
HMGCLL1-205ENST00000398661 SLC9A1P19634 815 aa10.73□□□□□ -0.69
HMGCLL1-205ENST00000398661 PTPN4P29074 926 aa10.73□□□□□ -0.69
HMGCLL1-205ENST00000398661 CHRNA3P32297 505 aa10.73□□□□□ -0.69
HMGCLL1-205ENST00000398661 GALCP54803 685 aa10.73□□□□□ -0.69
HMGCLL1-205ENST00000398661 SLC34A1Q06495 639 aa10.73□□□□□ -0.69
HMGCLL1-205ENST00000398661 AP1B1Q10567 949 aa10.73□□□□□ -0.69
HMGCLL1-205ENST00000398661 GSTA3Q16772 222 aa10.73□□□□□ -0.69
HMGCLL1-205ENST00000398661 TKFCQ3LXA3 575 aa10.73□□□□□ -0.69
HMGCLL1-205ENST00000398661 ZNF568Q3ZCX4 644 aa10.73□□□□□ -0.69
HMGCLL1-205ENST00000398661 DPY19L2P1Q6NXN4 242 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms