RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 C8AP07357 584 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 HNRNPA1P09651 372 aaKnown RBP eCLIP13.81□□□□□ -0.2
VPREB3-202ENST00000398465 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 OR1D2P34982 312 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 TAF6P49848 677 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 LILRA4P59901 499 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 ROR1Q01973 937 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 FAM160A1Q05DH4 1040 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 STK4Q13043 487 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 SNRNP35Q16560 246 aaKnown RBP13.81□□□□□ -0.2
VPREB3-202ENST00000398465 SV2CQ496J9 727 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 CCDC149Q6ZUS6 474 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 WDR49Q8IV35 697 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 NELFCDQ8IXH7 590 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 LRRC52Q8N7C0 313 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 XXYLT1Q8NBI6 393 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 CACTINQ8WUQ7 758 aaKnown RBP13.81□□□□□ -0.2
VPREB3-202ENST00000398465 PCIF1Q9H4Z3 704 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 DPP3Q9NY33 737 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 FBXL5Q9UKA1 691 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 DSEQ9UL01 958 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 MAFFQ9ULX9 164 aa13.81□□□□□ -0.2
VPREB3-202ENST00000398465 WDR27A2RRH5 827 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 PPEF2O14830 753 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 PRPF40AO75400 957 aaKnown RBP13.8□□□□□ -0.2
VPREB3-202ENST00000398465 OAZ2O95190 189 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 CYP11A1P05108 521 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 TMEM191BP0C7N4 346 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 WNT7BP56706 349 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 TFAMQ00059 246 aaKnown RBP13.8□□□□□ -0.2
VPREB3-202ENST00000398465 CTXN3Q4LDR2 81 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 TPGS2Q68CL5 300 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 RSPO2Q6UXX9 243 aaPredicted RBP13.8□□□□□ -0.2
VPREB3-202ENST00000398465 DSTYKQ6XUX3 929 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 CBWD2Q8IUF1 395 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 TDRD5Q8NAT2 981 aaKnown RBP13.8□□□□□ -0.2
VPREB3-202ENST00000398465 ZSWIM2Q8NEG5 633 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 SMG7Q92540 1137 aaKnown RBP13.8□□□□□ -0.2
VPREB3-202ENST00000398465 ZNF707Q96C28 371 aaPredicted RBP13.8□□□□□ -0.2
VPREB3-202ENST00000398465 PRKD2Q9BZL6 878 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 CHMP5Q9NZZ3 219 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 CDH22Q9UJ99 828 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 CLUHO75153 1309 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 NOTCH4Q99466 2003 aa13.8□□□□□ -0.2
VPREB3-202ENST00000398465 CCDC195A0A1B0GUA6 201 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 OR6C75A6NL08 312 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 PDXKO00764 312 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 SPTLC1O15269 473 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 RFPL2O75678 378 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 ABLIM3O94929 683 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 ITGB3P05106 788 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 ALADP13716 330 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 PSMD6Q15008 389 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 UVSSAQ2YD98 709 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 PPM1LQ5SGD2 360 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 USP37Q86T82 979 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 SLC9A9Q8IVB4 645 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 TMEM130Q8N3G9 435 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 C1orf127Q8N9H9 656 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 ENGASEQ8NFI3 743 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 ZNF461Q8TAF7 563 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 SLC7A14Q8TBB6 771 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 NOC3LQ8WTT2 800 aaKnown RBP13.79□□□□□ -0.2
VPREB3-202ENST00000398465 ANKRD36BP1Q96IX9 119 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 RPGRIP1Q96KN7 1286 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 SENP8Q96LD8 212 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 TIGD1Q96MW7 591 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 MTMR12Q9C0I1 747 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 KCTD10Q9H3F6 313 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 PDE11AQ9HCR9 933 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 WDR6Q9NNW5 1121 aaKnown RBP13.79□□□□□ -0.2
VPREB3-202ENST00000398465 INTS13Q9NVM9 706 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 RMND1Q9NWS8 449 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 HOOK1Q9UJC3 728 aaKnown RBP13.79□□□□□ -0.2
VPREB3-202ENST00000398465 PTPRDP23468 1912 aa13.79□□□□□ -0.2
VPREB3-202ENST00000398465 DOCK6Q96HP0 2047 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 PI4K2BG5E9Z4 385 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 DCXO43602 365 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 XYLBO75191 536 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 TNNC2P02585 160 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 WEE2P0C1S8 567 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 SPATA31D3P0C874 917 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 CPB1P15086 417 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 ATF2P15336 505 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 POLR2BP30876 1174 aaKnown RBP13.78□□□□□ -0.2
VPREB3-202ENST00000398465 CYP2J2P51589 502 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 CYP24A1Q07973 514 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 SNW1Q13573 536 aaKnown RBP13.78□□□□□ -0.2
VPREB3-202ENST00000398465 MYBPC2Q14324 1141 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 OVOS1Q6IE37 1185 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 SPATA31D4Q6ZUB0 917 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 OTOP3Q7RTS5 596 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 RNF135Q8IUD6 432 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 ELOA2Q8IYF1 753 aaPredicted RBP13.78□□□□□ -0.2
VPREB3-202ENST00000398465 ZDHHC14Q8IZN3 488 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 GUF1Q8N442 669 aaKnown RBP13.78□□□□□ -0.2
VPREB3-202ENST00000398465 CXorf38Q8TB03 319 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 SPATA18Q8TC71 538 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 CGRRF1Q99675 332 aa13.78□□□□□ -0.2
VPREB3-202ENST00000398465 C1QTNF1Q9BXJ1 281 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms