RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 TMC8Q8IU68 726 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 DAW1Q8N136 415 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 LEMD2Q8NC56 503 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 BEST2Q8NFU1 509 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 ASAH2Q9NR71 780 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 ARHGAP28Q9P2N2 729 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 YIPF1Q9Y548 306 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 NUB1Q9Y5A7 615 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 RALGAPA1Q6GYQ0 2036 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 CEP295Q9C0D2 2601 aa17.62■□□□□ 0.41
CUX2-202ENST00000397643 TXNDC11Q6PKC3 985 aa17.61■□□□□ 0.41
CUX2-202ENST00000397643 RNF19BQ6ZMZ0 732 aa17.61■□□□□ 0.41
CUX2-202ENST00000397643 ELMOD1Q8N336 334 aa17.61■□□□□ 0.41
CUX2-202ENST00000397643 TMEM130Q8N3G9 435 aa17.61■□□□□ 0.41
CUX2-202ENST00000397643 DDX12PQ92771 950 aa17.61■□□□□ 0.41
CUX2-202ENST00000397643 MSANTD3Q96H12 275 aa17.61■□□□□ 0.41
CUX2-202ENST00000397643 ZNF512Q96ME7 567 aaPredicted RBP17.61■□□□□ 0.41
CUX2-202ENST00000397643 TARS2Q9BW92 718 aaKnown RBP17.61■□□□□ 0.41
CUX2-202ENST00000397643 DNAJC25Q9H1X3 360 aa17.61■□□□□ 0.41
CUX2-202ENST00000397643 CRISPLD1Q9H336 500 aa17.61■□□□□ 0.41
CUX2-202ENST00000397643 MAFFQ9ULX9 164 aa17.61■□□□□ 0.41
CUX2-202ENST00000397643 SDK1Q7Z5N4 2213 aa17.6■□□□□ 0.41
CUX2-202ENST00000397643 SLC38A8A6NNN8 435 aa17.6■□□□□ 0.41
CUX2-202ENST00000397643 MCF2P10911 925 aa17.6■□□□□ 0.41
CUX2-202ENST00000397643 CNR2P34972 360 aa17.6■□□□□ 0.41
CUX2-202ENST00000397643 PEX3P56589 373 aa17.6■□□□□ 0.41
CUX2-202ENST00000397643 HAUS3Q68CZ6 603 aa17.6■□□□□ 0.41
CUX2-202ENST00000397643 LONP2Q86WA8 852 aa17.6■□□□□ 0.41
CUX2-202ENST00000397643 ACAP3Q96P50 834 aa17.6■□□□□ 0.41
CUX2-202ENST00000397643 LRRC3BQ96PB8 259 aa17.6■□□□□ 0.41
CUX2-202ENST00000397643 MKNK1Q9BUB5 465 aa17.6■□□□□ 0.41
CUX2-202ENST00000397643 MRPL4Q9BYD3 311 aaKnown RBP17.6■□□□□ 0.41
CUX2-202ENST00000397643 TMEM134Q9H6X4 195 aa17.6■□□□□ 0.41
CUX2-202ENST00000397643 SH2B1Q9NRF2 756 aaPredicted RBP17.6■□□□□ 0.41
CUX2-202ENST00000397643 CACNA1GO43497 2377 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 GREB1Q4ZG55 1949 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 MYBPHLA2RUH7 354 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 CHADO15335 359 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 MCM4P33991 863 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 MAPK7Q13164 816 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 ORC2Q13416 577 aaPredicted RBP17.59■□□□□ 0.41
CUX2-202ENST00000397643 LRRC32Q14392 662 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 ZNF174Q15697 407 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 SLC10A6Q3KNW5 377 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 STXBP5Q5T5C0 1151 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 MPZL3Q6UWV2 235 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.59■□□□□ 0.41
CUX2-202ENST00000397643 FAM160A2Q8N612 972 aaPredicted RBP17.59■□□□□ 0.41
CUX2-202ENST00000397643 APPL2Q8NEU8 664 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 SNX21Q969T3 373 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 GPR88Q9GZN0 384 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 C8orf33Q9H7E9 229 aaPredicted RBP17.59■□□□□ 0.41
CUX2-202ENST00000397643 TUBGCP4Q9UGJ1 667 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 PCDHB8Q9UN66 801 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 KIAA1024Q9UPX6 916 aa17.59■□□□□ 0.41
CUX2-202ENST00000397643 A0A1W2PRU2 124 aa17.58■□□□□ 0.4
CUX2-202ENST00000397643 CCDC169A6NNP5 214 aa17.58■□□□□ 0.4
CUX2-202ENST00000397643 CPB1P15086 417 aa17.58■□□□□ 0.4
CUX2-202ENST00000397643 HOXA6P31267 233 aa17.58■□□□□ 0.4
CUX2-202ENST00000397643 CTHP32929 405 aa17.58■□□□□ 0.4
CUX2-202ENST00000397643 CCT6AP40227 531 aaKnown RBP17.58■□□□□ 0.4
CUX2-202ENST00000397643 FXR2P51116 673 aaKnown RBP eCLIP17.58■□□□□ 0.4
CUX2-202ENST00000397643 GUCY1B3Q02153 619 aa17.58■□□□□ 0.4
CUX2-202ENST00000397643 CCINQ13939 588 aa17.58■□□□□ 0.4
CUX2-202ENST00000397643 TRIM29Q14134 588 aa17.58■□□□□ 0.4
CUX2-202ENST00000397643 HEATR6Q6AI08 1181 aaKnown RBP17.58■□□□□ 0.4
CUX2-202ENST00000397643 C1orf228Q6PIY5 440 aa17.58■□□□□ 0.4
CUX2-202ENST00000397643 C4orf32Q8N8J7 132 aa17.58■□□□□ 0.4
CUX2-202ENST00000397643 CSGALNACT1Q8TDX6 532 aa17.58■□□□□ 0.4
CUX2-202ENST00000397643 E2F7Q96AV8 911 aa17.58■□□□□ 0.4
CUX2-202ENST00000397643 ZBTB45Q96K62 511 aaPredicted RBP17.58■□□□□ 0.4
CUX2-202ENST00000397643 SLITRK6Q9H5Y7 841 aa17.58■□□□□ 0.4
CUX2-202ENST00000397643 NUP210Q8TEM1 1887 aaPredicted RBP17.58■□□□□ 0.4
CUX2-202ENST00000397643 SPECC1L-ADORA2AF8WAN1 911 aa17.57■□□□□ 0.4
CUX2-202ENST00000397643 M0QZQ0 153 aa17.57■□□□□ 0.4
CUX2-202ENST00000397643 HIP1RO75146 1068 aa17.57■□□□□ 0.4
CUX2-202ENST00000397643 OAZ2O95190 189 aa17.57■□□□□ 0.4
CUX2-202ENST00000397643 CD2BP2O95400 341 aaKnown RBP17.57■□□□□ 0.4
CUX2-202ENST00000397643 OR4Q2P0C623 313 aa17.57■□□□□ 0.4
CUX2-202ENST00000397643 DMP1Q13316 513 aaPredicted RBP17.57■□□□□ 0.4
CUX2-202ENST00000397643 DGKKQ5KSL6 1271 aa17.57■□□□□ 0.4
CUX2-202ENST00000397643 HSCBQ8IWL3 235 aa17.57■□□□□ 0.4
CUX2-202ENST00000397643 PGLYRP2Q96PD5 576 aa17.57■□□□□ 0.4
CUX2-202ENST00000397643 RUSC1Q9BVN2 902 aa17.57■□□□□ 0.4
CUX2-202ENST00000397643 DDX19AQ9NUU7 478 aaKnown RBP17.57■□□□□ 0.4
CUX2-202ENST00000397643 SPAG17Q6Q759 2223 aa17.57■□□□□ 0.4
CUX2-202ENST00000397643 FRYQ5TBA9 3013 aa17.57■□□□□ 0.4
CUX2-202ENST00000397643 KIF26AQ9ULI4 1882 aaPredicted RBP17.56■□□□□ 0.4
CUX2-202ENST00000397643 TM4SF5O14894 197 aa17.56■□□□□ 0.4
CUX2-202ENST00000397643 HARSP12081 509 aaKnown RBP17.56■□□□□ 0.4
CUX2-202ENST00000397643 PMLP29590 882 aa17.56■□□□□ 0.4
CUX2-202ENST00000397643 AARSP49588 968 aaKnown RBP eCLIP17.56■□□□□ 0.4
CUX2-202ENST00000397643 KPNA1P52294 538 aaPredicted RBP17.56■□□□□ 0.4
CUX2-202ENST00000397643 LIMK1P53667 647 aa17.56■□□□□ 0.4
CUX2-202ENST00000397643 YWHAHQ04917 246 aaPredicted RBP17.56■□□□□ 0.4
CUX2-202ENST00000397643 SEZ6Q53EL9 994 aa17.56■□□□□ 0.4
CUX2-202ENST00000397643 TTC38Q5R3I4 469 aa17.56■□□□□ 0.4
CUX2-202ENST00000397643 GAREM2Q75VX8 874 aa17.56■□□□□ 0.4
CUX2-202ENST00000397643 WDR5BQ86VZ2 330 aa17.56■□□□□ 0.4
CUX2-202ENST00000397643 RALGPS2Q86X27 583 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms