RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 NOP2P46087 812 aaKnown RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 TRPC3Q13507 836 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 PLCB4Q15147 1175 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 FAM102BQ5T8I3 360 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 CFAP61Q8NHU2 1237 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 TNIP3Q96KP6 325 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 XYLT2Q9H1B5 865 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 UTP11Q9Y3A2 253 aaKnown RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 PTCH2Q9Y6C5 1203 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 SLC16A4O15374 487 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 PHF2O75151 1096 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 CDH16O75309 829 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 DARSP14868 501 aaKnown RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 GCLMP48507 274 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 PCGF5Q86SE9 256 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 NOA1Q8NC60 698 aaKnown RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 STON2Q8WXE9 905 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 KREMEN1Q96MU8 473 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 FMO2Q99518 471 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 PDGFDQ9GZP0 370 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-206ENST00000397617 ADAM22Q9P0K1 906 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 PTPRJQ12913 1337 aa6.24□□□□□ -1.41
PTPRD-206ENST00000397617 MDM4O15151 490 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 FBXO21O94952 628 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 F9P00740 461 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 TCF7P36402 384 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 PDK2Q15119 407 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 SLC4A8Q2Y0W8 1093 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 ATF7IP2Q5U623 682 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 SLC39A4Q6P5W5 647 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 DAAM2Q86T65 1068 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 TDRPQ86YL5 185 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 THNSL1Q8IYQ7 743 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 RCOR2Q8IZ40 523 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 CMASQ8NFW8 434 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 BICD1Q96G01 975 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 MS4A4AQ96JQ5 239 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 CNPY3Q9BT09 278 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 TARS2Q9BW92 718 aaKnown RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 ZNF219Q9P2Y4 722 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 PUF60Q9UHX1 559 aaKnown RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 DMGDHQ9UI17 866 aaKnown RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 UMODL1Q5DID0 1318 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 IGF2BP3O00425 579 aaKnown RBP eCLIP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 PALMO75781 387 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 ENDOD1O94919 500 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 ATP1A1P05023 1023 aaKnown RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 ATP4AP20648 1035 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 LAMTOR4Q0VGL1 99 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 DRP2Q13474 957 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 HADHQ16836 314 aaKnown RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 TMCO4Q5TGY1 634 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 SLC26A9Q7LBE3 791 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 GLIS3Q8NEA6 775 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 TCHPQ9BT92 498 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 RSAD1Q9HA92 442 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 ADGRA3Q8IWK6 1321 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 SCN1AP35498 2009 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 SIGLEC16A6NMB1 481 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 PCSK2P16519 638 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 TNNI1P19237 187 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 ADCY2Q08462 1091 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 ZNF606Q8WXB4 792 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 MMS19Q96T76 1030 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 RPF1Q9H9Y2 349 aaKnown RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 BARX2Q9UMQ3 279 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 CCL15-CCL14A0A0B4J2E2 113 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 HEXIM1O94992 359 aaKnown RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 FTLP02792 175 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 LGALS2P05162 132 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 NOGQ13253 232 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 XRCC4Q13426 336 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 CCL15Q16663 113 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 ZC2HC1CQ53FD0 456 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 GPAT2Q6NUI2 795 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 PCSK9Q8NBP7 692 aaKnown RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 BANK1Q8NDB2 785 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 MRM3Q9HC36 420 aaKnown RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 TMEM191CA6NGB0 347 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 TRIM49P0CI25 452 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 TRIM49CP0CI26 452 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 AKR1A1P14550 325 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 SLC4A11Q8NBS3 891 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 MCRS1Q96EZ8 462 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 SPATA33Q96N06 139 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 PCYT2Q99447 389 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 TCRBV5S1A1TA0A578 114 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 LRRIQ3A6PVS8 624 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 TMEM189-UBE2V1I3L0A0 370 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 RNF8O76064 485 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 TJP3O95049 919 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 ARIH2O95376 493 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 HSP90AA4PQ58FG1 418 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 DUPD1Q68J44 220 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 PRPF31Q8WWY3 499 aaKnown RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 RTP4Q96DX8 246 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 FGFBP2Q9BYJ0 223 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 GPR88Q9GZN0 384 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 UBE2TQ9NPD8 197 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 SNTG2Q9NY99 539 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms