RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ARHGEF37A1IGU5 675 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 MARCH6O60337 910 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 CCNT1O60563 726 aaKnown RBP10.38□□□□□ -0.75
NEDD9-203ENST00000397378 CDC45O75419 566 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 C1QL1O75973 258 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 RECQL4O94761 1208 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 MICAL2O94851 1124 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 BAG4O95429 457 aaKnown RBP10.38□□□□□ -0.75
NEDD9-203ENST00000397378 MYL4P12829 197 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 GJA1P17302 382 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 PSMA5P28066 241 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 ANKS3Q6ZW76 656 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 ELMOD1Q8N336 334 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 CAMKK1Q8N5S9 505 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 SLC39A7Q92504 469 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 AIFM3Q96NN9 605 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 HSD17B14Q9BPX1 270 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 EIF2AK1Q9BQI3 630 aaKnown RBP10.38□□□□□ -0.75
NEDD9-203ENST00000397378 FZD8Q9H461 694 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 POLR3BQ9NW08 1133 aaPredicted RBP10.38□□□□□ -0.75
NEDD9-203ENST00000397378 RAI2Q9Y5P3 530 aa10.38□□□□□ -0.75
NEDD9-203ENST00000397378 THADAQ6YHU6 1953 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 ATG2BQ96BY7 2078 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 LRRIQ4A6NIV6 560 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 CPLX1O14810 134 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 N4BP3O15049 544 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 MEFVO15553 781 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-203ENST00000397378 XRCC6P12956 609 aaKnown RBP eCLIP10.37□□□□□ -0.75
NEDD9-203ENST00000397378 RARRES1P49788 294 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 LMAN2Q12907 356 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 TOB2Q14106 344 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-203ENST00000397378 ZNF423Q2M1K9 1284 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 CDCA2Q69YH5 1023 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-203ENST00000397378 IQCEQ6IPM2 695 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 CPLX2Q6PUV4 134 aaKnown RBP10.37□□□□□ -0.75
NEDD9-203ENST00000397378 HAUS6Q7Z4H7 955 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 RAB44Q7Z6P3 723 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-203ENST00000397378 HS6ST3Q8IZP7 471 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 ZNF461Q8TAF7 563 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 E2F7Q96AV8 911 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 ZNF274Q96GC6 653 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-203ENST00000397378 DDX27Q96GQ7 796 aaKnown RBP10.37□□□□□ -0.75
NEDD9-203ENST00000397378 CRELD1Q96HD1 420 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 ZFYVE19Q96K21 471 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 POLR3FQ9H1D9 316 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-203ENST00000397378 CXCL16Q9H2A7 254 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 PDZD7Q9H5P4 517 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 TRPV4Q9HBA0 871 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 CYP4F11Q9HBI6 524 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 SNTG2Q9NY99 539 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 KCNJ14Q9UNX9 436 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 INVSQ9Y283 1065 aa10.37□□□□□ -0.75
NEDD9-203ENST00000397378 NUP210Q8TEM1 1887 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-203ENST00000397378 TTLL13PA6NNM8 815 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 TRAPPC3O43617 180 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 B3GAT3O94766 335 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 ABLIM3O94929 683 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 DHPSP49366 369 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-203ENST00000397378 ROR1Q01973 937 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 FCHO2Q0JRZ9 810 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 TEAD2Q15562 447 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 TRIM61Q5EBN2 209 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 PMS2CLQ68D20 193 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 SLC8B1Q6J4K2 584 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 CD300LGQ6UXG3 332 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 GPIHBP1Q8IV16 184 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 ZBTB8OSQ8IWT0 167 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 PIGKQ92643 395 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 RSPRY1Q96DX4 576 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 ZNF512Q96ME7 567 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-203ENST00000397378 CCDC43Q96MW1 224 aaKnown RBP10.36□□□□□ -0.75
NEDD9-203ENST00000397378 UROC1Q96N76 676 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 PPP1R10Q96QC0 940 aaKnown RBP10.36□□□□□ -0.75
NEDD9-203ENST00000397378 TMEM209Q96SK2 561 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 ADPGKQ9BRR6 497 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 NUSAP1Q9BXS6 441 aaKnown RBP10.36□□□□□ -0.75
NEDD9-203ENST00000397378 PCDHA12Q9UN75 941 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 PCNX2A6NKB5 2137 aa10.36□□□□□ -0.75
NEDD9-203ENST00000397378 J3QKU1 62 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 TK2O00142 265 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 DPYSL4O14531 572 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 MOSPD3O75425 235 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 APBB3O95704 486 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 PRKCBP05771 671 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 ATF2P15336 505 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 TKTP29401 623 aaKnown RBP10.35□□□□□ -0.75
NEDD9-203ENST00000397378 DGKEP52429 567 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 ATXN3P54252 364 aaPredicted RBP10.35□□□□□ -0.75
NEDD9-203ENST00000397378 ARPP19P56211 112 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 FAM193AP78312 1265 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 GRSF1Q12849 480 aaKnown RBP eCLIP10.35□□□□□ -0.75
NEDD9-203ENST00000397378 SEMA3BQ13214 749 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 PRPF4BQ13523 1007 aaKnown RBP10.35□□□□□ -0.75
NEDD9-203ENST00000397378 MAPK6Q16659 721 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 UPP1Q16831 310 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 ARHGAP29Q52LW3 1261 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 PIK3AP1Q6ZUJ8 805 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 RUFY3Q7L099 469 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 PIP4P1Q86T03 277 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 C11orf74Q86VG3 221 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms