RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 TRAPPC12Q8WVT3 735 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 SGIP1Q9BQI5 828 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 PASKQ96RG2 1323 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 TRAPPC3O43617 180 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 NOMO3P69849 1222 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 TMEM63BQ5T3F8 832 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 MDM1Q8TC05 714 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 AVENQ9NQS1 362 aaPredicted RBP25.27■■□□□ 1.64
PABPN1-202ENST00000397276 DNAJC17Q9NVM6 304 aaKnown RBP25.27■■□□□ 1.64
PABPN1-202ENST00000397276 ASIC3Q9UHC3 531 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 GOLGA6L7A0A1B0GV03 622 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 FSCN2O14926 492 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 RFC5P40937 340 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 ENPEPQ07075 957 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 AGBL2Q5U5Z8 902 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 RAPGEF5Q92565 580 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 LRRC19Q9H756 370 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 KLHL11Q9NVR0 708 aa25.27■■□□□ 1.64
PABPN1-202ENST00000397276 MAFO75444 373 aaPredicted RBP25.26■■□□□ 1.63
PABPN1-202ENST00000397276 TAS2R40P59535 323 aa25.26■■□□□ 1.63
PABPN1-202ENST00000397276 CEP57Q86XR8 500 aa25.26■■□□□ 1.63
PABPN1-202ENST00000397276 SEC16BQ96JE7 1060 aa25.26■■□□□ 1.63
PABPN1-202ENST00000397276 R3HDM2Q9Y2K5 976 aaKnown RBP25.26■■□□□ 1.63
PABPN1-202ENST00000397276 MAMLD1Q13495 774 aa25.26■■□□□ 1.63
PABPN1-202ENST00000397276 LIN9Q5TKA1 542 aa25.26■■□□□ 1.63
PABPN1-202ENST00000397276 TMEM134Q9H6X4 195 aa25.26■■□□□ 1.63
PABPN1-202ENST00000397276 NOP56O00567 594 aaKnown RBP25.25■■□□□ 1.63
PABPN1-202ENST00000397276 MYBL1P10243 752 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 EDNRBP24530 442 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 EIF3BP55884 814 aaKnown RBP25.25■■□□□ 1.63
PABPN1-202ENST00000397276 MYL6P60660 151 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 CALCOCO2Q13137 446 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 ZFYVE27Q5T4F4 411 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 METTL7BQ6UX53 244 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 DDX27Q96GQ7 796 aaKnown RBP25.25■■□□□ 1.63
PABPN1-202ENST00000397276 IMPG2Q9BZV3 1241 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 ASCC2Q9H1I8 757 aaPredicted RBP25.25■■□□□ 1.63
PABPN1-202ENST00000397276 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.25■■□□□ 1.63
PABPN1-202ENST00000397276 TLR3O15455 904 aaKnown RBP25.25■■□□□ 1.63
PABPN1-202ENST00000397276 RALAP11233 206 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 RDXP35241 583 aaKnown RBP25.25■■□□□ 1.63
PABPN1-202ENST00000397276 LAMTOR4Q0VGL1 99 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 SCARA5Q6ZMJ2 495 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 RHPN2Q8IUC4 686 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 SULF1Q8IWU6 871 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 ZNF606Q8WXB4 792 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 COPS5Q92905 334 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 TRIM11Q96F44 468 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 TXNRD2Q9NNW7 524 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 PARP2Q9UGN5 583 aa25.25■■□□□ 1.63
PABPN1-202ENST00000397276 MSCO60682 206 aa25.24■■□□□ 1.63
PABPN1-202ENST00000397276 PROSCO94903 275 aa25.24■■□□□ 1.63
PABPN1-202ENST00000397276 Q3C1V9 767 aa25.24■■□□□ 1.63
PABPN1-202ENST00000397276 ATP13A4Q4VNC1 1196 aa25.24■■□□□ 1.63
PABPN1-202ENST00000397276 THNSL1Q8IYQ7 743 aa25.24■■□□□ 1.63
PABPN1-202ENST00000397276 FUKQ8N0W3 1084 aa25.24■■□□□ 1.63
PABPN1-202ENST00000397276 ART4Q93070 314 aa25.24■■□□□ 1.63
PABPN1-202ENST00000397276 DCPSQ96C86 337 aaKnown RBP25.24■■□□□ 1.63
PABPN1-202ENST00000397276 RPL7AP62424 266 aaKnown RBP25.24■■□□□ 1.63
PABPN1-202ENST00000397276 ANKRD20A8PQ5CZ79 823 aa25.24■■□□□ 1.63
PABPN1-202ENST00000397276 CYB5D1Q6P9G0 228 aa25.24■■□□□ 1.63
PABPN1-202ENST00000397276 NLRP4Q96MN2 994 aa25.24■■□□□ 1.63
PABPN1-202ENST00000397276 WEE2P0C1S8 567 aa25.23■■□□□ 1.63
PABPN1-202ENST00000397276 POTEJP0CG39 1038 aa25.23■■□□□ 1.63
PABPN1-202ENST00000397276 SLC1A1P43005 524 aa25.23■■□□□ 1.63
PABPN1-202ENST00000397276 TFAMQ00059 246 aaKnown RBP25.23■■□□□ 1.63
PABPN1-202ENST00000397276 EPS8L3Q8TE67 593 aaKnown RBP25.23■■□□□ 1.63
PABPN1-202ENST00000397276 SCLT1Q96NL6 688 aa25.23■■□□□ 1.63
PABPN1-202ENST00000397276 TBXAS1P24557 533 aaPredicted RBP25.23■■□□□ 1.63
PABPN1-202ENST00000397276 IFI35P80217 286 aaPredicted RBP25.23■■□□□ 1.63
PABPN1-202ENST00000397276 E2F5Q15329 346 aa25.23■■□□□ 1.63
PABPN1-202ENST00000397276 TMEM132AQ24JP5 1023 aa25.23■■□□□ 1.63
PABPN1-202ENST00000397276 FBXO16Q8IX29 292 aaPredicted RBP25.23■■□□□ 1.63
PABPN1-202ENST00000397276 TMEM130Q8N3G9 435 aa25.23■■□□□ 1.63
PABPN1-202ENST00000397276 C12orf50Q8NA57 414 aaPredicted RBP25.23■■□□□ 1.63
PABPN1-202ENST00000397276 MRPL4Q9BYD3 311 aaKnown RBP25.23■■□□□ 1.63
PABPN1-202ENST00000397276 TOM1L1O75674 476 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 NUDT17P0C025 328 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 BRD2P25440 801 aaKnown RBP25.22■■□□□ 1.63
PABPN1-202ENST00000397276 TTLL12Q14166 644 aaPredicted RBP25.22■■□□□ 1.63
PABPN1-202ENST00000397276 ANKS1BQ7Z6G8 1248 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 PRUNE1Q86TP1 453 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 HOOK3Q86VS8 718 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 PI4K2BG5E9Z4 385 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 PRKCBP05771 671 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 TCF4P15884 667 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 CDR1P51861 262 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 BRSK2Q8IWQ3 736 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 CEP120Q8N960 986 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 PWWP2AQ96N64 755 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 DDX23Q9BUQ8 820 aaKnown RBP25.22■■□□□ 1.63
PABPN1-202ENST00000397276 RIPK2O43353 540 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 PARP9Q8IXQ6 854 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.22■■□□□ 1.63
PABPN1-202ENST00000397276 GPR20Q99678 358 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 ACO2Q99798 780 aaKnown RBP25.22■■□□□ 1.63
PABPN1-202ENST00000397276 SELENOSQ9BQE4 189 aa25.22■■□□□ 1.63
PABPN1-202ENST00000397276 MRPL47Q9HD33 250 aaKnown RBP25.22■■□□□ 1.63
PABPN1-202ENST00000397276 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.22■■□□□ 1.63
PABPN1-202ENST00000397276 CSDE1O75534 798 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms