RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 FAM200AQ8TCP9 573 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 TAF4BQ92750 862 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 TSPY26PQ9H489 355 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 PRDM12Q9H4Q4 367 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 NGRNQ9NPE2 291 aaKnown RBP17.68■□□□□ 0.42
AP1S3-202ENST00000396653 CHST7Q9NS84 486 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 FANCLQ9NW38 375 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 GDAP2Q9NXN4 497 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 PCDHB8Q9UN66 801 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 SSX2IPQ9Y2D8 614 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 COQ4Q9Y3A0 265 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 LAMA2P24043 3122 aaKnown RBP17.67■□□□□ 0.42
AP1S3-202ENST00000396653 BECN2A8MW95 431 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 KPNA7A9QM74 516 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 SPTLC1O15269 473 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 CST3P01034 146 aaPredicted RBP17.67■□□□□ 0.42
AP1S3-202ENST00000396653 HLA-DRAP01903 254 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 AFPP02771 609 aaKnown RBP17.67■□□□□ 0.42
AP1S3-202ENST00000396653 URODP06132 367 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 ZNF18P17022 549 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 IGFBP6P24592 240 aaPredicted RBP17.67■□□□□ 0.42
AP1S3-202ENST00000396653 DNAJB1P25685 340 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 PIK3CAP42336 1068 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 FMO5P49326 533 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 DSG1Q02413 1049 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 KCNH2Q12809 1159 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 CAMK1Q14012 370 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 CBWD6Q4V339 395 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 TCP11X2Q5H9J9 407 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 CBWD3Q5JTY5 395 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 CBWD5Q5RIA9 395 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 FAM171A1Q5VUB5 890 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 PDXDC1Q6P996 788 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 FBXL13Q8NEE6 735 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 MRPL38Q96DV4 380 aaKnown RBP17.67■□□□□ 0.42
AP1S3-202ENST00000396653 HPDLQ96IR7 371 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 XYLT2Q9H1B5 865 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 MMRN2Q9H8L6 949 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 CBX8Q9HC52 389 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 IRAK3Q9Y616 596 aa17.67■□□□□ 0.42
AP1S3-202ENST00000396653 CHD9Q3L8U1 2897 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 RFXAPO00287 272 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 ODC1P11926 461 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 TYMPP19971 482 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 GLUD2P49448 558 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 MYL6P60660 151 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 MYL7Q01449 175 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 SMC1AQ14683 1233 aaKnown RBP17.66■□□□□ 0.42
AP1S3-202ENST00000396653 SGSM1Q2NKQ1 1148 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 DSTYKQ6XUX3 929 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 APPL2Q8NEU8 664 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 ANKRD20A12PQ8NF67 263 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 SPATA18Q8TC71 538 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 TAS1R2Q8TE23 839 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 PIK3R5Q8WYR1 880 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 FAXDC2Q96IV6 333 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 SENP8Q96LD8 212 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 GAS2L1Q99501 681 aaPredicted RBP17.66■□□□□ 0.42
AP1S3-202ENST00000396653 TCF25Q9BQ70 676 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 TUBGCP2Q9BSJ2 902 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 TTPALQ9BTX7 342 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 IMPG2Q9BZV3 1241 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 HSD3B7Q9H2F3 369 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 ENTPD7Q9NQZ7 604 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 DSEQ9UL01 958 aa17.66■□□□□ 0.42
AP1S3-202ENST00000396653 GTPBP10A4D1E9 387 aaKnown RBP17.65■□□□□ 0.42
AP1S3-202ENST00000396653 ASS1P00966 412 aaKnown RBP17.65■□□□□ 0.42
AP1S3-202ENST00000396653 CYP11A1P05108 521 aa17.65■□□□□ 0.42
AP1S3-202ENST00000396653 TKTP29401 623 aaKnown RBP17.65■□□□□ 0.42
AP1S3-202ENST00000396653 ERVFC1P60507 584 aa17.65■□□□□ 0.42
AP1S3-202ENST00000396653 CREMQ03060 361 aa17.65■□□□□ 0.42
AP1S3-202ENST00000396653 CETN1Q12798 172 aa17.65■□□□□ 0.42
AP1S3-202ENST00000396653 PTPN14Q15678 1187 aa17.65■□□□□ 0.42
AP1S3-202ENST00000396653 ZNF699Q32M78 642 aa17.65■□□□□ 0.42
AP1S3-202ENST00000396653 KIAA0319Q5VV43 1072 aa17.65■□□□□ 0.42
AP1S3-202ENST00000396653 SCARA3Q6AZY7 606 aa17.65■□□□□ 0.42
AP1S3-202ENST00000396653 DPH6Q7L8W6 267 aa17.65■□□□□ 0.42
AP1S3-202ENST00000396653 TMC7Q7Z402 723 aa17.65■□□□□ 0.42
AP1S3-202ENST00000396653 DEFB123Q8N688 67 aa17.65■□□□□ 0.42
AP1S3-202ENST00000396653 CCDC150Q8NCX0 1101 aa17.65■□□□□ 0.42
AP1S3-202ENST00000396653 ANP32EQ9BTT0 268 aa17.65■□□□□ 0.42
AP1S3-202ENST00000396653 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.65■□□□□ 0.42
AP1S3-202ENST00000396653 RAB20Q9NX57 234 aa17.65■□□□□ 0.42
AP1S3-202ENST00000396653 I3L4J1 428 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 LILRB3O75022 631 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 FAM163BP0C2L3 166 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 TPM4P67936 248 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 VWA3BQ502W6 1294 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 HSP90AA4PQ58FG1 418 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 ZNF667Q5HYK9 610 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 RTP2Q5QGT7 225 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 KIAA1841Q6NSI8 718 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 ANKS3Q6ZW76 656 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 Q7L0L9 218 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 TAS1R1Q7RTX1 841 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 LIMS2Q7Z4I7 341 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 CREBRFQ8IUR6 639 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 TMEM86AQ8N2M4 240 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 TOP6BLQ8N6T0 577 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 FAM161BQ96MY7 647 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms