RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 DR1Q01658 176 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 PPFIA1Q13136 1202 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 TRADDQ15628 312 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 SCARA3Q6AZY7 606 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 PPP1R16BQ96T49 567 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 CELF4Q9BZC1 486 aaKnown RBP15.94■□□□□ 0.14
CBX3-202ENST00000396386 PDZD7Q9H5P4 517 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 FAM114A2Q9NRY5 505 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 CISHQ9NSE2 258 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 ADAM22Q9P0K1 906 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 KAT6AQ92794 2004 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 OPA1O60313 960 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 LSM8O95777 96 aaKnown RBP15.93■□□□□ 0.14
CBX3-202ENST00000396386 VTNP04004 478 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 PYGMP11217 842 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 ECHS1P30084 290 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 CHRNA3P32297 505 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 GYS2P54840 703 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 ACVR2BQ13705 512 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 GRIK4Q16099 956 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 KYAT1Q16773 422 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 SCARA5Q6ZMJ2 495 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 GOLGA6L1Q8N7Z2 621 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 SEC14L1Q92503 715 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 SCLT1Q96NL6 688 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 PTPN18Q99952 460 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 XYLT2Q9H1B5 865 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 GPBP1L1Q9HC44 474 aaPredicted RBP15.93■□□□□ 0.14
CBX3-202ENST00000396386 MRPL47Q9HD33 250 aaKnown RBP15.93■□□□□ 0.14
CBX3-202ENST00000396386 SLC5A4Q9NY91 659 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 RASAL2Q9UJF2 1139 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 ADAM21Q9UKJ8 722 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 MTUS1Q9ULD2 1270 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 GPR25O00155 361 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 MYO1FO00160 1098 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 STAG3L1P0CL83 205 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 SSTR3P32745 418 aaPredicted RBP15.93■□□□□ 0.14
CBX3-202ENST00000396386 HSPA9P38646 679 aaKnown RBP15.93■□□□□ 0.14
CBX3-202ENST00000396386 ASPAP45381 313 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 DGKDQ16760 1214 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 CFAP58Q5T655 872 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 IQSEC1Q6DN90 963 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 MMS22LQ6ZRQ5 1243 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 SLC13A5Q86YT5 568 aaPredicted RBP15.93■□□□□ 0.14
CBX3-202ENST00000396386 TMEM192Q8IY95 271 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 NPLOC4Q8TAT6 608 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 NLRP7Q8WX94 980 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 ZNF606Q8WXB4 792 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 RIN2Q8WYP3 895 aaPredicted RBP15.93■□□□□ 0.14
CBX3-202ENST00000396386 TRIM51Q9BSJ1 452 aa15.93■□□□□ 0.14
CBX3-202ENST00000396386 PROSCO94903 275 aa15.92■□□□□ 0.14
CBX3-202ENST00000396386 NFICP08651 508 aa15.92■□□□□ 0.14
CBX3-202ENST00000396386 BRD2P25440 801 aaKnown RBP15.92■□□□□ 0.14
CBX3-202ENST00000396386 DDX42Q86XP3 938 aaKnown RBP eCLIP15.92■□□□□ 0.14
CBX3-202ENST00000396386 PRELID2Q8N945 189 aa15.92■□□□□ 0.14
CBX3-202ENST00000396386 CPB2Q96IY4 423 aa15.92■□□□□ 0.14
CBX3-202ENST00000396386 RUNDC3BQ96NL0 473 aa15.92■□□□□ 0.14
CBX3-202ENST00000396386 SH3GL2Q99962 352 aa15.92■□□□□ 0.14
CBX3-202ENST00000396386 TRIM7Q9C029 511 aa15.92■□□□□ 0.14
CBX3-202ENST00000396386 FAM204AQ9H8W3 233 aa15.92■□□□□ 0.14
CBX3-202ENST00000396386 PSD3Q9NYI0 1048 aa15.92■□□□□ 0.14
CBX3-202ENST00000396386 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.92■□□□□ 0.14
CBX3-202ENST00000396386 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.92■□□□□ 0.14
CBX3-202ENST00000396386 CITO14578 2027 aa15.92■□□□□ 0.14
CBX3-202ENST00000396386 GOLGA8KD6RF30 607 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 DAPK3O43293 454 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 ERLIN2O94905 339 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 CALB1P05937 261 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 KRT19P08727 400 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 ARF4P18085 180 aaPredicted RBP15.91■□□□□ 0.14
CBX3-202ENST00000396386 CYP2C19P33261 490 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 PTP4A2Q12974 167 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 C2CD6Q53TS8 623 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 ZNF667Q5HYK9 610 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 PLEKHA7Q6IQ23 1121 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 LLGL2Q6P1M3 1020 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 PHLDB2Q86SQ0 1253 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 ZNF410Q86VK4 478 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 JAMLQ86YT9 394 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 LRRC45Q96CN5 670 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 ZIM3Q96PE6 472 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 DPH5Q9H2P9 285 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 LACTBL1A8MY62 500 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 CSDE1O75534 798 aaKnown RBP15.91■□□□□ 0.14
CBX3-202ENST00000396386 CYP1B1Q16678 543 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 JADE1Q6IE81 842 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 TMEM35BQ8NCS4 154 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.91■□□□□ 0.14
CBX3-202ENST00000396386 MAGOHBQ96A72 148 aaKnown RBP15.91■□□□□ 0.14
CBX3-202ENST00000396386 C18orf8Q96DM3 657 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 FAXDC2Q96IV6 333 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 NEUROG2Q9H2A3 272 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 ASB7Q9H672 318 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 RRAGCQ9HB90 399 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 PARVAQ9NVD7 372 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 SIX4Q9UIU6 781 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 PCDHGC3Q9UN70 934 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 POLIQ9UNA4 740 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 CEP83Q9Y592 693 aa15.91■□□□□ 0.14
CBX3-202ENST00000396386 PSTPIP1O43586 416 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms