RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 EPHB4P54760 987 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 MYL6P60660 151 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 HTRA4P83105 476 aaPredicted RBP10.6□□□□□ -0.71
DDX39B-202ENST00000396172 SOX4Q06945 474 aaPredicted RBP10.6□□□□□ -0.71
DDX39B-202ENST00000396172 BTG3Q14201 252 aaPredicted RBP10.6□□□□□ -0.71
DDX39B-202ENST00000396172 UPP1Q16831 310 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 RASIP1Q5U651 963 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 KLHDC7AQ5VTJ3 777 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 HERC6Q8IVU3 1022 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 COLGALT2Q8IYK4 626 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 PPM1KQ8N3J5 372 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 CXorf38Q8TB03 319 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 SPAG5Q96R06 1193 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 UBE2OQ9C0C9 1292 aaKnown RBP10.6□□□□□ -0.71
DDX39B-202ENST00000396172 STK39Q9UEW8 545 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 RWDD3Q9Y3V2 267 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 NUB1Q9Y5A7 615 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 CASTOR2A6NHX0 329 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 UCHL3P15374 230 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 PPM1AP35813 382 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 GUCY2FP51841 1108 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 GSDMDP57764 484 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 ELAVL2Q12926 359 aaKnown RBP10.6□□□□□ -0.71
DDX39B-202ENST00000396172 DCLRE1AQ6PJP8 1040 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 SPATA18Q8TC71 538 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 SEMA4DQ92854 862 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 RAD9AQ99638 391 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 COLEC11Q9BWP8 271 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 XYLT2Q9H1B5 865 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 CXCL16Q9H2A7 254 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 GANQ9H2C0 597 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 CYP3A43Q9HB55 503 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 GOLGA2P5Q9HBQ8 144 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 GDAP2Q9NXN4 497 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 KPNA7A9QM74 516 aa10.59□□□□□ -0.71
DDX39B-202ENST00000396172 CST3P01034 146 aaPredicted RBP10.59□□□□□ -0.71
DDX39B-202ENST00000396172 CCDC172P0C7W6 258 aa10.59□□□□□ -0.71
DDX39B-202ENST00000396172 OR1G1P47890 313 aa10.59□□□□□ -0.71
DDX39B-202ENST00000396172 ALDH7A1P49419 539 aaKnown RBP10.59□□□□□ -0.71
DDX39B-202ENST00000396172 CLCNKBP51801 687 aa10.59□□□□□ -0.71
DDX39B-202ENST00000396172 AFF1P51825 1210 aaKnown RBP10.59□□□□□ -0.71
DDX39B-202ENST00000396172 CUL2Q13617 745 aa10.59□□□□□ -0.71
DDX39B-202ENST00000396172 TSR1Q2NL82 804 aaKnown RBP10.59□□□□□ -0.71
DDX39B-202ENST00000396172 WDR72Q3MJ13 1102 aa10.59□□□□□ -0.71
DDX39B-202ENST00000396172 PAN2Q504Q3 1202 aaKnown RBP10.59□□□□□ -0.71
DDX39B-202ENST00000396172 SPOUT1Q5T280 376 aaKnown RBP10.59□□□□□ -0.71
DDX39B-202ENST00000396172 DPH6Q7L8W6 267 aa10.59□□□□□ -0.71
DDX39B-202ENST00000396172 FIBCD1Q8N539 461 aa10.59□□□□□ -0.71
DDX39B-202ENST00000396172 NRDE2Q9H7Z3 1164 aa10.59□□□□□ -0.71
DDX39B-202ENST00000396172 SIX2Q9NPC8 291 aa10.59□□□□□ -0.71
DDX39B-202ENST00000396172 LUC7L2Q9Y383 392 aaKnown RBP10.59□□□□□ -0.71
DDX39B-202ENST00000396172 NRDCO43847 1150 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 TLL1O43897 1013 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 HUS1O60921 280 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 B3GAT3O94766 335 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 ALDH2P05091 517 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 FAM163BP0C2L3 166 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 ODC1P11926 461 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 GATMP50440 423 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 POLR2FP61218 127 aaKnown RBP10.58□□□□□ -0.72
DDX39B-202ENST00000396172 ZBED6P86452 979 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 FAM117BQ6P1L5 589 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 TOP6BLQ8N6T0 577 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 KIAA1524Q8TCG1 905 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 FAM84AQ96KN4 292 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 ZNF558Q96NG5 402 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 GDF15Q99988 308 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 PI4K2AQ9BTU6 479 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 STK33Q9BYT3 514 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 BCO2Q9BYV7 579 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 TTYH3Q9C0H2 523 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 UBE2TQ9NPD8 197 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-202ENST00000396172 CXXC1Q9P0U4 656 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-202ENST00000396172 DNAJC12Q9UKB3 198 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 DSEQ9UL01 958 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 PYCARDQ9ULZ3 195 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 CAPN11Q9UMQ6 739 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 FAN1Q9Y2M0 1017 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 FHOD1Q9Y613 1164 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 SF3B1O75533 1304 aaKnown RBP eCLIP10.58□□□□□ -0.722e-6■■■■□ 20.7
DDX39B-202ENST00000396172 AKR1B15C9JRZ8 316 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-202ENST00000396172 DDHD2O94830 711 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 GYPCP04921 128 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 BMP8BP34820 402 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 KLK7P49862 253 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 LILRA4P59901 499 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 LRMPQ12912 555 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 RAPGEF1Q13905 1077 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 IQCEQ6IPM2 695 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 PHLDB3Q6NSJ2 640 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 DSTYKQ6XUX3 929 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 ZNF280BQ86YH2 543 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 TMEM86AQ8N2M4 240 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 APPL2Q8NEU8 664 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 SP7Q8TDD2 431 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-202ENST00000396172 NXF1Q9UBU9 619 aaKnown RBP10.58□□□□□ -0.72
DDX39B-202ENST00000396172 ADAM28Q9UKQ2 775 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 SNX9Q9Y5X1 595 aa10.58□□□□□ -0.72
DDX39B-202ENST00000396172 MFAP3LO75121 409 aa10.57□□□□□ -0.72
DDX39B-202ENST00000396172 NOL4O94818 638 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms