RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 FBXO16Q8IX29 292 aaPredicted RBP17.86■□□□□ 0.45
NUP50-202ENST00000396096 KATNAL2Q8IYT4 538 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 PARVAQ9NVD7 372 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 WHRNQ9P202 907 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 TULP2O00295 520 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 B4GALT4O60513 344 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 LSP1P33241 339 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 MYL6P60660 151 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 SLMAPQ14BN4 828 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 FEZF2Q8TBJ5 459 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 BCAS4Q8TDM0 211 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 TLCD1Q96CP7 247 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 OPTNQ96CV9 577 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 NFKBIZQ9BYH8 718 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 HOMER3Q9NSC5 361 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 RSPH14Q9UHP6 348 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 SLC12A6Q9UHW9 1150 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 ASB14A6NK59 587 aa17.85■□□□□ 0.45
NUP50-202ENST00000396096 CALB1P05937 261 aa17.85■□□□□ 0.45
NUP50-202ENST00000396096 TXNP10599 105 aaKnown RBP17.85■□□□□ 0.45
NUP50-202ENST00000396096 CDH5P33151 784 aaPredicted RBP17.85■□□□□ 0.45
NUP50-202ENST00000396096 KCNJ1P48048 391 aa17.85■□□□□ 0.45
NUP50-202ENST00000396096 POU5F1BQ06416 359 aa17.85■□□□□ 0.45
NUP50-202ENST00000396096 KLF1Q13351 362 aaPredicted RBP17.85■□□□□ 0.45
NUP50-202ENST00000396096 TTLL4Q14679 1199 aa17.85■□□□□ 0.45
NUP50-202ENST00000396096 KRT71Q3SY84 523 aa17.85■□□□□ 0.45
NUP50-202ENST00000396096 C2CD6Q53TS8 623 aa17.85■□□□□ 0.45
NUP50-202ENST00000396096 ATF7IP2Q5U623 682 aa17.85■□□□□ 0.45
NUP50-202ENST00000396096 HOOK3Q86VS8 718 aa17.85■□□□□ 0.45
NUP50-202ENST00000396096 RHPN2Q8IUC4 686 aa17.85■□□□□ 0.45
NUP50-202ENST00000396096 RNF25Q96BH1 459 aaPredicted RBP17.85■□□□□ 0.45
NUP50-202ENST00000396096 L3MBTL3Q96JM7 780 aaPredicted RBP17.85■□□□□ 0.45
NUP50-202ENST00000396096 TMEM109Q9BVC6 243 aa17.85■□□□□ 0.45
NUP50-202ENST00000396096 DCLK3Q9C098 648 aa17.85■□□□□ 0.45
NUP50-202ENST00000396096 ZNF518BQ9C0D4 1074 aa17.85■□□□□ 0.45
NUP50-202ENST00000396096 MGAMO43451 1857 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 TCRBV5S1A1TA0A578 114 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 TLR3O15455 904 aaKnown RBP17.84■□□□□ 0.45
NUP50-202ENST00000396096 RARGP13631 454 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 GUCY1A3Q02108 690 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 IFFO1Q0D2I5 559 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 PTK6Q13882 451 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 DENND2CQ68D51 928 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 TTC19Q6DKK2 380 aaPredicted RBP17.84■□□□□ 0.45
NUP50-202ENST00000396096 PHLDB2Q86SQ0 1253 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 CROCCP2Q86T23 111 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 EXD1Q8NHP7 514 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 GRK7Q8WTQ7 553 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 C1orf54Q8WWF1 131 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 HERPUD2Q9BSE4 406 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 EPN3Q9H201 632 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 CENPHQ9H3R5 247 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 CISHQ9NSE2 258 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 IP6K2Q9UHH9 426 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 FEZ2Q9UHY8 353 aaPredicted RBP17.84■□□□□ 0.45
NUP50-202ENST00000396096 PCDHGC3Q9UN70 934 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 TNFSF13BQ9Y275 285 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 RRP15Q9Y3B9 282 aaKnown RBP17.84■□□□□ 0.45
NUP50-202ENST00000396096 TAS2R40P59535 323 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 MBTD1Q05BQ5 628 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 TRPC3Q13507 836 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 TTLL12Q14166 644 aaPredicted RBP17.84■□□□□ 0.45
NUP50-202ENST00000396096 PPP1R7Q15435 360 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 PTGISQ16647 500 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 GTF3C2Q8WUA4 911 aaPredicted RBP17.84■□□□□ 0.45
NUP50-202ENST00000396096 COPS5Q92905 334 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 FAXDC2Q96IV6 333 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 XYLT2Q9H1B5 865 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 CHST7Q9NS84 486 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 PTPN22Q9Y2R2 807 aa17.84■□□□□ 0.45
NUP50-202ENST00000396096 PLXNA1Q9UIW2 1896 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 TMEM191CA6NGB0 347 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 IL18RAPO95256 599 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 C22orf31O95567 290 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 TNNC2P02585 160 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 TMEM191BP0C7N4 346 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 YWHAEP62258 255 aaKnown RBP17.83■□□□□ 0.44
NUP50-202ENST00000396096 PPP2R2AP63151 447 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 KRT17Q04695 432 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 FAM187BQ17R55 369 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 ZNF568Q3ZCX4 644 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 ZNF484Q5JVG2 852 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 EFCAB12Q6NXP0 572 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 RHBDF2Q6PJF5 856 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 TMEM35BQ8NCS4 154 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 TRAPPC12Q8WVT3 735 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 PGM2Q96G03 612 aa17.83■□□□□ 0.44
NUP50-202ENST00000396096 NOVA2Q9UNW9 492 aaKnown RBP17.83■□□□□ 0.44
NUP50-202ENST00000396096 TP73O15350 636 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 ITIH2P19823 946 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 EIF4BP23588 611 aaKnown RBP17.82■□□□□ 0.44
NUP50-202ENST00000396096 HPDP32754 393 aaPredicted RBP17.82■□□□□ 0.44
NUP50-202ENST00000396096 ASPAP45381 313 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 TAP1Q03518 808 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 CALCOCO2Q13137 446 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 CCNG2Q16589 344 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 ZNF699Q32M78 642 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 LDLRAD1Q5T700 205 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 LRRC38Q5VT99 294 aa17.82■□□□□ 0.44
NUP50-202ENST00000396096 EEF1DP3Q658K8 133 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms