RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 HAO1Q9UJM8 370 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 BAZ2BQ9UIF8 2168 aaKnown RBP9.62□□□□□ -0.87
RAE1-202ENST00000395840 A6NJR5 290 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 CCDC169A6NNP5 214 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 GTPBP6O43824 516 aaPredicted RBP9.62□□□□□ -0.87
RAE1-202ENST00000395840 LYNP07948 512 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 RARBP10826 455 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 HOXD12P35452 270 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 KRT2P35908 639 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 HPCAP84074 193 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 OCRLQ01968 901 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 SULT2A1Q06520 285 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 TTLL4Q14679 1199 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 KPNB1Q14974 876 aaKnown RBP9.62□□□□□ -0.87
RAE1-202ENST00000395840 SLC44A4Q53GD3 710 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 NIPA1Q7RTP0 329 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 SPATA24Q86W54 205 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 ADSSL1Q8N142 457 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 ATP11CQ8NB49 1132 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 ARRDC4Q8NCT1 418 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 TAF4BQ92750 862 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 TRIM31Q9BZY9 425 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 MIS12Q9H081 205 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 FAM207AQ9NSI2 230 aaPredicted RBP9.62□□□□□ -0.87
RAE1-202ENST00000395840 TBC1D7Q9P0N9 293 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 USP20Q9Y2K6 914 aa9.62□□□□□ -0.87
RAE1-202ENST00000395840 FAM205CA6NFA0 338 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 EPHB6O15197 1021 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 TTI1O43156 1089 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 ZNF865P0CJ78 1059 aaPredicted RBP9.61□□□□□ -0.87
RAE1-202ENST00000395840 TAL1P17542 331 aaPredicted RBP9.61□□□□□ -0.87
RAE1-202ENST00000395840 EIF2AK2P19525 551 aaKnown RBP9.61□□□□□ -0.87
RAE1-202ENST00000395840 SREBF1P36956 1147 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 USP11P51784 963 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 SH3BGRP55822 239 aaPredicted RBP9.61□□□□□ -0.87
RAE1-202ENST00000395840 KHDC1Q4VXA5 237 aaKnown RBP9.61□□□□□ -0.87
RAE1-202ENST00000395840 BRDTQ58F21 947 aaPredicted RBP9.61□□□□□ -0.87
RAE1-202ENST00000395840 FIGNQ5HY92 759 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 VSIG1Q86XK7 387 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 ECHDC2Q86YB7 292 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 SCUBE1Q8IWY4 988 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 HAUS1Q96CS2 278 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 DHRS1Q96LJ7 313 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 FMO2Q99518 471 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 ANO3Q9BYT9 981 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 CELF4Q9BZC1 486 aaKnown RBP9.61□□□□□ -0.87
RAE1-202ENST00000395840 MYLK2Q9H1R3 596 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 EPB41L4BQ9H329 900 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 COL20A1Q9P218 1284 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 LARSQ9P2J5 1176 aaKnown RBP9.61□□□□□ -0.87
RAE1-202ENST00000395840 NPHP3-ACAD11A0A0J9YXS1 232 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 CCDC194A0A1B0GVG4 234 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 DUSP11O75319 330 aaKnown RBP9.61□□□□□ -0.87
RAE1-202ENST00000395840 AGTP01019 485 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 LMNAP02545 664 aaKnown RBP9.61□□□□□ -0.87
RAE1-202ENST00000395840 CYP3A4P08684 503 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 SERPINB3P29508 390 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 MTIF2P46199 727 aaKnown RBP9.61□□□□□ -0.87
RAE1-202ENST00000395840 SLCO1A2P46721 670 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 RRAGAQ7L523 313 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 PALB2Q86YC2 1186 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 MAP7D3Q8IWC1 876 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 RNF25Q96BH1 459 aaPredicted RBP9.61□□□□□ -0.87
RAE1-202ENST00000395840 PPP1R14BQ96C90 147 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 GPRASP2Q96D09 838 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 DYDC2Q96IM9 177 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 MPP4Q96JB8 637 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 TUBGCP5Q96RT8 1024 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 NOC4LQ9BVI4 516 aaKnown RBP9.61□□□□□ -0.87
RAE1-202ENST00000395840 NACA2Q9H009 215 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 MLXIPLQ9NP71 852 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 ARHGEF38Q9NXL2 777 aa9.61□□□□□ -0.87
RAE1-202ENST00000395840 LRRC53A6NM62 1247 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 MAGEB3O15480 346 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 NUDT17P0C025 328 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 MYCLP12524 364 aaPredicted RBP9.6□□□□□ -0.87
RAE1-202ENST00000395840 KLRC1P26715 233 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 ICAM3P32942 547 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 ZNF76P36508 570 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 TNFAIP2Q03169 654 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 NONOQ15233 471 aaKnown RBP eCLIP9.6□□□□□ -0.87
RAE1-202ENST00000395840 RCN1Q15293 331 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 DENND2CQ68D51 928 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 RNF43Q68DV7 783 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 PDXDC2PQ6P474 469 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 MOXD1Q6UVY6 613 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 INTS8Q75QN2 995 aaKnown RBP9.6□□□□□ -0.87
RAE1-202ENST00000395840 CYP4X1Q8N118 509 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 RIBC1Q8N443 379 aaPredicted RBP9.6□□□□□ -0.87
RAE1-202ENST00000395840 CSGALNACT2Q8N6G5 542 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 UHMK1Q8TAS1 419 aaKnown RBP9.6□□□□□ -0.87
RAE1-202ENST00000395840 NAT14Q8WUY8 206 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 DNAJC1Q96KC8 554 aaKnown RBP9.6□□□□□ -0.87
RAE1-202ENST00000395840 CATSPER2Q96P56 530 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 TXLNGYQ9BZA5 131 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 AP5M1Q9H0R1 490 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 UNC93B1Q9H1C4 597 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.6□□□□□ -0.87
RAE1-202ENST00000395840 ZNF180Q9UJW8 692 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 TMEM247A6NEH6 219 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms