RNA–Protein interactions for RNA: ENST00000395601.7

SNTB1-201, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNTB1, Length 5,164 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-201ENST00000395601 COL1A1P02452 1464 aaPredicted RBP18.69■□□□□ 0.58
SNTB1-201ENST00000395601 EFHC1Q5JVL4 640 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 MAP4K3Q8IVH8 894 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 ITGA11Q9UKX5 1188 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 TACC3Q9Y6A5 838 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 GLRA2P23416 452 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 HSDL1Q3SXM5 330 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 HEATR6Q6AI08 1181 aaKnown RBP18.69■□□□□ 0.58
SNTB1-201ENST00000395601 ZBTB45Q96K62 511 aaPredicted RBP18.69■□□□□ 0.58
SNTB1-201ENST00000395601 ARFGEF2Q9Y6D5 1785 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 LOC102724159A0A0B4J2E5 919 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 DEUP1Q05D60 604 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 PWP2Q15269 919 aaKnown RBP18.69■□□□□ 0.58
SNTB1-201ENST00000395601 NBPF20Q3BBV1 942 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 ZNF280DQ6N043 979 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 ZNF449Q6P9G9 518 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 MRPL9Q9BYD2 267 aaKnown RBP18.69■□□□□ 0.58
SNTB1-201ENST00000395601 KIAA1257Q9ULG3 409 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 PACSIN2Q9UNF0 486 aaPredicted RBP18.69■□□□□ 0.58
SNTB1-201ENST00000395601 ZFXP17010 805 aaPredicted RBP18.69■□□□□ 0.58
SNTB1-201ENST00000395601 CCL23P55773 120 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 MAP7D1Q3KQU3 841 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 DCAF6Q58WW2 860 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 ABRAQ8N0Z2 381 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 NKX2-3Q8TAU0 364 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.69■□□□□ 0.584e-8■■■□□ 16.5
SNTB1-201ENST00000395601 TRAF3IP3Q9Y228 551 aa18.69■□□□□ 0.58
SNTB1-201ENST00000395601 GYPCP04921 128 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 SLC35G2Q8TBE7 412 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 FSD1LQ9BXM9 530 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 SH3BP1Q9Y3L3 701 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 FOXN3O00409 490 aaPredicted RBP18.68■□□□□ 0.58
SNTB1-201ENST00000395601 LHX1P48742 406 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 SH3D19Q5HYK7 790 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 MGARPQ8TDB4 240 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 CELF4Q9BZC1 486 aaKnown RBP18.68■□□□□ 0.58
SNTB1-201ENST00000395601 ATP8A1Q9Y2Q0 1164 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 AOC2O75106 756 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 IRF1P10914 325 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 ACO1P21399 889 aaKnown RBP18.68■□□□□ 0.58
SNTB1-201ENST00000395601 DNAJB2P25686 324 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 AP1B1Q10567 949 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 NAB2Q15742 525 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 SLC7A14Q8TBB6 771 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 CLEC4DQ8WXI8 215 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 IFT43Q96FT9 208 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 HSD17B14Q9BPX1 270 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 TMEM134Q9H6X4 195 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 NEMP1O14524 444 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 PNMA6AP0CW24 399 aaPredicted RBP18.68■□□□□ 0.58
SNTB1-201ENST00000395601 VDRP11473 427 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 SERPINB6P35237 376 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 RRP1BQ14684 758 aaKnown RBP18.68■□□□□ 0.58
SNTB1-201ENST00000395601 TMEM199Q8N511 208 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 FBF1Q8TES7 1133 aa18.68■□□□□ 0.58
SNTB1-201ENST00000395601 E2F4Q16254 413 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 ARHGAP15Q53QZ3 475 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 C10orf120Q5SQS8 335 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 RAPH1Q70E73 1250 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 C1orf131Q8NDD1 294 aaKnown RBP18.67■□□□□ 0.58
SNTB1-201ENST00000395601 INTS13Q9NVM9 706 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 ZNF214Q9UL59 606 aaPredicted RBP18.67■□□□□ 0.58
SNTB1-201ENST00000395601 MMP3P08254 477 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 PIGHQ14442 188 aaPredicted RBP18.67■□□□□ 0.58
SNTB1-201ENST00000395601 GPR20Q99678 358 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 NCAM1P13591 858 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 KCNA3P22001 575 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 RAD51Q06609 339 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 MROH7Q68CQ1 1323 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 DFFAO00273 331 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 PODXLO00592 558 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 PRKCZQ05513 592 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 BRSK2Q8IWQ3 736 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 ARHGAP18Q8N392 663 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 CYP3A43Q9HB55 503 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 CNTNAP1P78357 1384 aa18.67■□□□□ 0.58
SNTB1-201ENST00000395601 LACTBL1A8MY62 500 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 RAP1GAPP47736 663 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 TSTA3Q13630 321 aaPredicted RBP18.66■□□□□ 0.58
SNTB1-201ENST00000395601 UGCGQ16739 394 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 SYN2Q92777 582 aaPredicted RBP18.66■□□□□ 0.58
SNTB1-201ENST00000395601 DUSP11O75319 330 aaKnown RBP18.66■□□□□ 0.58
SNTB1-201ENST00000395601 STX2P32856 288 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 PRMT2P55345 433 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 SPOPLQ6IQ16 392 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 PPP4R1Q8TF05 950 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 CYFIP2Q96F07 1278 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 PRDM10Q9NQV6 1147 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 SOWAHBA6NEL2 793 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 APOL1O14791 398 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 ITGA7Q13683 1181 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 CDKL3Q8IVW4 592 aaPredicted RBP18.66■□□□□ 0.58
SNTB1-201ENST00000395601 COL20A1Q9P218 1284 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 CENPUQ71F23 418 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 OSBPL9Q96SU4 736 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 GAD1Q99259 594 aa18.66■□□□□ 0.58
SNTB1-201ENST00000395601 TIMM13Q9Y5L4 95 aaPredicted RBP18.66■□□□□ 0.58
SNTB1-201ENST00000395601 PMLP29590 882 aa18.65■□□□□ 0.58
SNTB1-201ENST00000395601 PMS1P54277 932 aaKnown RBP18.65■□□□□ 0.58
SNTB1-201ENST00000395601 EPHB4P54760 987 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms