RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 TMBIM4Q9HC24 238 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 EBAG9O00559 213 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 PPFIA2O75334 1257 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 RPL21P46778 160 aaKnown RBP14.86□□□□□ -0.03
SNCA-204ENST00000394989 KCNJ1P48048 391 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 ATP1A2P50993 1020 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 SKOR1P84550 965 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 LDLRAD1Q5T700 205 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 ZBTB8OSQ8IWT0 167 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 EFCAB13Q8IY85 973 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 ZNF606Q8WXB4 792 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 TRIM11Q96F44 468 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 CAPS2Q9BXY5 557 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 EPB41L4BQ9H329 900 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 YY1AP1Q9H869 796 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 MYO1FO00160 1098 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 THAP12O43422 761 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 GJB6O95452 261 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 COILP38432 576 aaPredicted RBP14.86□□□□□ -0.03
SNCA-204ENST00000394989 EEF1DP3Q658K8 133 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 EFCAB12Q6NXP0 572 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 ARMCX2Q7L311 632 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 PHF13Q86YI8 300 aaPredicted RBP14.86□□□□□ -0.03
SNCA-204ENST00000394989 TMEM192Q8IY95 271 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 C12orf50Q8NA57 414 aaPredicted RBP14.86□□□□□ -0.03
SNCA-204ENST00000394989 DDX27Q96GQ7 796 aaKnown RBP14.86□□□□□ -0.03
SNCA-204ENST00000394989 SMARCAD1Q9H4L7 1026 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 ADAM22Q9P0K1 906 aa14.86□□□□□ -0.03
SNCA-204ENST00000394989 ACKR2O00590 384 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 FSCN2O14926 492 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 MAP2K2P36507 400 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 AP3M2P53677 418 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 PLTPP55058 493 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 OSTNP61366 133 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 MBTD1Q05BQ5 628 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 ARHGAP1Q07960 439 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 MAMDC4Q6UXC1 1216 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 TRIM72Q6ZMU5 477 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 TMEM130Q8N3G9 435 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 ATP8A1Q9Y2Q0 1164 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 PTPN22Q9Y2R2 807 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 CAPN7Q9Y6W3 813 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 A0A087WUV0 522 aaPredicted RBP14.85□□□□□ -0.03
SNCA-204ENST00000394989 SLC26A2P50443 739 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 EMC10Q5UCC4 262 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 PLEKHA7Q6IQ23 1121 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 MPZL3Q6UWV2 235 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 THNSL1Q8IYQ7 743 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 XYLT2Q9H1B5 865 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 C2orf40Q9H1Z8 148 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 CXorf56Q9H5V9 222 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 LRRC19Q9H756 370 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 PLXNA1Q9UIW2 1896 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 INO80B-WBP1J3KQ70 363 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 PROSCO94903 275 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 C22orf31O95567 290 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 CD58P19256 250 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 HNRNPH1P31943 449 aaKnown RBP14.85□□□□□ -0.03
SNCA-204ENST00000394989 SLC1A1P43005 524 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 TTLL4Q14679 1199 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 DUOXA2Q1HG44 320 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 ATF7IP2Q5U623 682 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 TAPT1Q6NXT6 567 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 IMPG2Q9BZV3 1241 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 INO80BQ9C086 356 aaPredicted RBP14.85□□□□□ -0.03
SNCA-204ENST00000394989 IFT122Q9HBG6 1241 aa14.85□□□□□ -0.03
SNCA-204ENST00000394989 PODXLO00592 558 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 MEFVO15553 781 aaPredicted RBP14.84□□□□□ -0.03
SNCA-204ENST00000394989 HBP1O60381 514 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 CSDE1O75534 798 aaKnown RBP14.84□□□□□ -0.03
SNCA-204ENST00000394989 TAS2R40P59535 323 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 GNGT1P63211 74 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 MTMR3Q13615 1198 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 ZNF394Q53GI3 561 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 UBAP2Q5T6F2 1119 aaKnown RBP14.84□□□□□ -0.03
SNCA-204ENST00000394989 KDM7AQ6ZMT4 941 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 EXOC8Q8IYI6 725 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 CCDC105Q8IYK2 499 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 SHCBP1Q8NEM2 672 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 C1orf54Q8WWF1 131 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 VCPIP1Q96JH7 1222 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 CISHQ9NSE2 258 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 RASAL2Q9UJF2 1139 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 MTUS1Q9ULD2 1270 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 TP73O15350 636 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 MMP8P22894 467 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 ASPAP45381 313 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 TFAMQ00059 246 aaKnown RBP14.84□□□□□ -0.03
SNCA-204ENST00000394989 SF3A3Q12874 501 aaKnown RBP eCLIP14.84□□□□□ -0.03
SNCA-204ENST00000394989 SNAPC2Q13487 334 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 ZNF568Q3ZCX4 644 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 DPY19L2Q6NUT2 758 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 ARMC9Q7Z3E5 817 aa14.84□□□□□ -0.03
SNCA-204ENST00000394989 HMGB1P1B2RPK0 211 aaPredicted RBP14.83□□□□□ -0.03
SNCA-204ENST00000394989 WEE2P0C1S8 567 aa14.83□□□□□ -0.03
SNCA-204ENST00000394989 NR1D1P20393 614 aa14.83□□□□□ -0.03
SNCA-204ENST00000394989 FNTAP49354 379 aa14.83□□□□□ -0.03
SNCA-204ENST00000394989 RPL7AP62424 266 aaKnown RBP14.83□□□□□ -0.03
SNCA-204ENST00000394989 IGBP1P78318 339 aa14.83□□□□□ -0.03
SNCA-204ENST00000394989 ANKS1BQ7Z6G8 1248 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms