RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 FBXL5Q9UKA1 691 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 PCDHA13Q9Y5I0 950 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 ARID2Q68CP9 1835 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 COL1A2P08123 1366 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 SSU72P8A0A1W2PR75 194 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 MACROD2A1Z1Q3 448 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 RRN3P2A6NIE6 340 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 KIAA0391O15091 583 aaKnown RBP7.47□□□□□ -1.21
RTN4-205ENST00000394609 POLR3GO15318 223 aaPredicted RBP7.47□□□□□ -1.21
RTN4-205ENST00000394609 FAM189A1O60320 539 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 LDHAP00338 332 aaKnown RBP7.47□□□□□ -1.21
RTN4-205ENST00000394609 CYBAP13498 195 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 FGFR4P22455 802 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 MCM3P25205 808 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 GTF2H1P32780 548 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 SOX5P35711 763 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 USP8P40818 1118 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 GPC3P51654 580 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 GTF2A1P52655 376 aaPredicted RBP7.47□□□□□ -1.21
RTN4-205ENST00000394609 CORO7P57737 925 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 MCCD1P59942 119 aaPredicted RBP7.47□□□□□ -1.21
RTN4-205ENST00000394609 MCL1Q07820 350 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 KIF5AQ12840 1032 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 BIRC3Q13489 604 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 IRF5Q13568 498 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 QPCTQ16769 361 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 TTC31Q49AM3 519 aaPredicted RBP7.47□□□□□ -1.21
RTN4-205ENST00000394609 GNASQ5JWF2 1037 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 RUFY4Q6ZNE9 571 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 TSHZ1Q6ZSZ6 1077 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 EFCAB13Q8IY85 973 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 TMEM192Q8IY95 271 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 PPM1KQ8N3J5 372 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 FBXL13Q8NEE6 735 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 OR5B17Q8NGF7 314 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 CPB2Q96IY4 423 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 MYCBPQ99417 103 aaPredicted RBP7.47□□□□□ -1.21
RTN4-205ENST00000394609 PARD6BQ9BYG5 372 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 PTPRHQ9HD43 1115 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 NRCAMQ92823 1304 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 GPR25O00155 361 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 ABLIM1O14639 778 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 PMM2O15305 246 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 TREHO43280 583 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 DUSP11O75319 330 aaKnown RBP7.46□□□□□ -1.22
RTN4-205ENST00000394609 CLSTN1O94985 981 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 LCA5LO95447 670 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 C4BPAP04003 597 aaKnown RBP7.46□□□□□ -1.22
RTN4-205ENST00000394609 CYP2C9P11712 490 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 PROZP22891 400 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 MAGEA1P43355 309 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 VAV2P52735 878 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 CLDN10P78369 228 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 PURAQ00577 322 aaKnown RBP7.46□□□□□ -1.22
RTN4-205ENST00000394609 CACNB2Q08289 660 aaPredicted RBP7.46□□□□□ -1.22
RTN4-205ENST00000394609 KIF22Q14807 665 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 SLC18A3Q16572 532 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 TDRD10Q5VZ19 366 aaKnown RBP7.46□□□□□ -1.22
RTN4-205ENST00000394609 MPZL3Q6UWV2 235 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 CXCL17Q6UXB2 119 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 SRGAP1Q7Z6B7 1085 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 SLC35F6Q8N357 371 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 ZNF784Q8NCA9 323 aaPredicted RBP7.46□□□□□ -1.22
RTN4-205ENST00000394609 LRRN4CLQ8ND94 238 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 DNAJB3Q8WWF6 145 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 KREMEN1Q96MU8 473 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 NFKBIZQ9BYH8 718 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 ACP6Q9NPH0 428 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 MYO1AQ9UBC5 1043 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 MYO6Q9UM54 1294 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 COQ4Q9Y3A0 265 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 Q9Y3F1 56 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 JRKLQ9Y4A0 524 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 CNTNAP2Q9UHC6 1331 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 HTTP42858 3142 aa7.46□□□□□ -1.22
RTN4-205ENST00000394609 BRCA2P51587 3418 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 A6NNZ2 444 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 HAS3O00219 553 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 OGTO15294 1046 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 KRT86O43790 486 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 ZEB2O60315 1214 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 PHACTR2O75167 634 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 VNN1O95497 513 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 HLA-DRAP01903 254 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 FERP16591 822 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 ARF4P18085 180 aaPredicted RBP7.45□□□□□ -1.22
RTN4-205ENST00000394609 CCND3P30281 292 aaPredicted RBP7.45□□□□□ -1.22
RTN4-205ENST00000394609 PIK3CAP42336 1068 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 LMAN1P49257 510 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 POU5F1BQ06416 359 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 TUBB8Q3ZCM7 444 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 ZACNQ401N2 412 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 BEND6Q5SZJ8 279 aaPredicted RBP7.45□□□□□ -1.22
RTN4-205ENST00000394609 SPOPLQ6IQ16 392 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 C15orf39Q6ZRI6 1047 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 GLYCTKQ8IVS8 523 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 BRSK2Q8IWQ3 736 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 C7orf31Q8N865 590 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 CD99L2Q8TCZ2 262 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 HELQQ8TDG4 1101 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms