RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 WDR27A2RRH5 827 aa33.27■■■□□ 2.92
CMTM4-202ENST00000394106 PIRO00625 290 aa33.27■■■□□ 2.92
CMTM4-202ENST00000394106 SYKP43405 635 aa33.27■■■□□ 2.92
CMTM4-202ENST00000394106 NDUFA8P51970 172 aa33.27■■■□□ 2.92
CMTM4-202ENST00000394106 ZXDAP98168 799 aa33.27■■■□□ 2.92
CMTM4-202ENST00000394106 TFAMQ00059 246 aaKnown RBP33.27■■■□□ 2.92
CMTM4-202ENST00000394106 YWHAHQ04917 246 aaPredicted RBP33.27■■■□□ 2.92
CMTM4-202ENST00000394106 USP37Q86T82 979 aa33.27■■■□□ 2.92
CMTM4-202ENST00000394106 ZNF461Q8TAF7 563 aa33.27■■■□□ 2.92
CMTM4-202ENST00000394106 ANO9A1A5B4 782 aa33.26■■■□□ 2.91
CMTM4-202ENST00000394106 SPTLC1O15269 473 aa33.26■■■□□ 2.91
CMTM4-202ENST00000394106 GBP2P32456 591 aaPredicted RBP33.26■■■□□ 2.91
CMTM4-202ENST00000394106 NUCB2P80303 420 aa33.26■■■□□ 2.91
CMTM4-202ENST00000394106 UVSSAQ2YD98 709 aa33.26■■■□□ 2.91
CMTM4-202ENST00000394106 NT5DC4Q86YG4 428 aa33.26■■■□□ 2.91
CMTM4-202ENST00000394106 FSIP1Q8NA03 581 aa33.26■■■□□ 2.91
CMTM4-202ENST00000394106 SCFD1Q8WVM8 642 aa33.26■■■□□ 2.91
CMTM4-202ENST00000394106 UBE4BO95155 1302 aa33.26■■■□□ 2.91
CMTM4-202ENST00000394106 KIAA0391O15091 583 aaKnown RBP33.25■■■□□ 2.91
CMTM4-202ENST00000394106 XYLBO75191 536 aa33.25■■■□□ 2.91
CMTM4-202ENST00000394106 ASGR2P07307 311 aa33.25■■■□□ 2.91
CMTM4-202ENST00000394106 HOXA9P31269 272 aa33.25■■■□□ 2.91
CMTM4-202ENST00000394106 ELF1P32519 619 aa33.25■■■□□ 2.91
CMTM4-202ENST00000394106 GRASPQ7Z6J2 395 aaPredicted RBP33.25■■■□□ 2.91
CMTM4-202ENST00000394106 SENP8Q96LD8 212 aa33.25■■■□□ 2.91
CMTM4-202ENST00000394106 EXOC1Q9NV70 894 aa33.25■■■□□ 2.91
CMTM4-202ENST00000394106 HSPBP1Q9NZL4 362 aa33.25■■■□□ 2.91
CMTM4-202ENST00000394106 A0A1W2PQ27 194 aa33.24■■■□□ 2.91
CMTM4-202ENST00000394106 A0A1W2PQ64 194 aa33.24■■■□□ 2.91
CMTM4-202ENST00000394106 A0A1W2PQD8 194 aa33.24■■■□□ 2.91
CMTM4-202ENST00000394106 PRRG1O14668 218 aa33.24■■■□□ 2.91
CMTM4-202ENST00000394106 KLRC4O43908 158 aa33.24■■■□□ 2.91
CMTM4-202ENST00000394106 N4BP1O75113 896 aaKnown RBP33.24■■■□□ 2.91
CMTM4-202ENST00000394106 ABLIM3O94929 683 aa33.24■■■□□ 2.91
CMTM4-202ENST00000394106 ODC1P11926 461 aa33.24■■■□□ 2.91
CMTM4-202ENST00000394106 CPB1P15086 417 aa33.24■■■□□ 2.91
CMTM4-202ENST00000394106 PDE11AQ9HCR9 933 aa33.24■■■□□ 2.91
CMTM4-202ENST00000394106 SCN1AP35498 2009 aa33.24■■■□□ 2.91
CMTM4-202ENST00000394106 FAM237AA0A1B0GTK4 181 aa33.23■■■□□ 2.91
CMTM4-202ENST00000394106 PRR33A8MZF0 331 aa33.23■■■□□ 2.91
CMTM4-202ENST00000394106 TGFB1I1O43294 461 aa33.23■■■□□ 2.91
CMTM4-202ENST00000394106 OAZ2O95190 189 aa33.23■■■□□ 2.91
CMTM4-202ENST00000394106 PAX3P23760 479 aa33.23■■■□□ 2.91
CMTM4-202ENST00000394106 GET4Q7L5D6 327 aaPredicted RBP33.23■■■□□ 2.91
CMTM4-202ENST00000394106 GOLPH3LQ9H4A5 285 aa33.23■■■□□ 2.91
CMTM4-202ENST00000394106 CYP4F11Q9HBI6 524 aa33.23■■■□□ 2.91
CMTM4-202ENST00000394106 AGPAT3Q9NRZ7 376 aa33.23■■■□□ 2.91
CMTM4-202ENST00000394106 ATF2P15336 505 aa33.22■■■□□ 2.91
CMTM4-202ENST00000394106 TYMPP19971 482 aa33.22■■■□□ 2.91
CMTM4-202ENST00000394106 COL9A1P20849 921 aa33.22■■■□□ 2.91
CMTM4-202ENST00000394106 TAF6P49848 677 aa33.22■■■□□ 2.91
CMTM4-202ENST00000394106 NTHL1P78549 312 aa33.22■■■□□ 2.91
CMTM4-202ENST00000394106 KMT5BQ4FZB7 885 aa33.22■■■□□ 2.91
CMTM4-202ENST00000394106 OVOS1Q6IE37 1185 aa33.22■■■□□ 2.91
CMTM4-202ENST00000394106 CBWD2Q8IUF1 395 aa33.22■■■□□ 2.91
CMTM4-202ENST00000394106 CACTINQ8WUQ7 758 aaKnown RBP33.22■■■□□ 2.91
CMTM4-202ENST00000394106 FAM84AQ96KN4 292 aa33.22■■■□□ 2.91
CMTM4-202ENST00000394106 SORCS3Q9UPU3 1222 aa33.22■■■□□ 2.91
CMTM4-202ENST00000394106 MYO10Q9HD67 2058 aa33.22■■■□□ 2.91
CMTM4-202ENST00000394106 ZNF233A6NK53 670 aa33.21■■■□□ 2.91
CMTM4-202ENST00000394106 CLIC2O15247 247 aa33.21■■■□□ 2.91
CMTM4-202ENST00000394106 FSHRP23945 695 aa33.21■■■□□ 2.91
CMTM4-202ENST00000394106 CYP2J2P51589 502 aa33.21■■■□□ 2.91
CMTM4-202ENST00000394106 TPGS2Q68CL5 300 aa33.21■■■□□ 2.91
CMTM4-202ENST00000394106 TRIM67Q6ZTA4 783 aa33.21■■■□□ 2.91
CMTM4-202ENST00000394106 RTL10Q7L3V2 364 aa33.21■■■□□ 2.91
CMTM4-202ENST00000394106 HS2ST1Q7LGA3 356 aa33.21■■■□□ 2.91
CMTM4-202ENST00000394106 MYADMQ96S97 322 aa33.21■■■□□ 2.91
CMTM4-202ENST00000394106 DOCK6Q96HP0 2047 aa33.21■■■□□ 2.91
CMTM4-202ENST00000394106 SEC24AO95486 1093 aa33.2■■■□□ 2.91
CMTM4-202ENST00000394106 OR4Q2P0C623 313 aa33.2■■■□□ 2.91
CMTM4-202ENST00000394106 POLR2BP30876 1174 aaKnown RBP33.2■■■□□ 2.91
CMTM4-202ENST00000394106 ADCY1Q08828 1119 aa33.2■■■□□ 2.91
CMTM4-202ENST00000394106 MTMR3Q13615 1198 aa33.2■■■□□ 2.91
CMTM4-202ENST00000394106 BMT2Q1RMZ1 405 aa33.2■■■□□ 2.91
CMTM4-202ENST00000394106 OXCT2Q9BYC2 517 aaPredicted RBP33.2■■■□□ 2.91
CMTM4-202ENST00000394106 HCFC1R1Q9NWW0 138 aa33.2■■■□□ 2.91
CMTM4-202ENST00000394106 TSC2P49815 1807 aa33.2■■■□□ 2.91
CMTM4-202ENST00000394106 ARHGEF37A1IGU5 675 aa33.19■■■□□ 2.9
CMTM4-202ENST00000394106 CYB561D2O14569 222 aa33.19■■■□□ 2.9
CMTM4-202ENST00000394106 LRG1P02750 347 aa33.19■■■□□ 2.9
CMTM4-202ENST00000394106 ITGB3P05106 788 aa33.19■■■□□ 2.9
CMTM4-202ENST00000394106 MYL1P05976 194 aa33.19■■■□□ 2.9
CMTM4-202ENST00000394106 STK4Q13043 487 aa33.19■■■□□ 2.9
CMTM4-202ENST00000394106 LMBRD2Q68DH5 695 aaPredicted RBP33.19■■■□□ 2.9
CMTM4-202ENST00000394106 RNF19BQ6ZMZ0 732 aa33.19■■■□□ 2.9
CMTM4-202ENST00000394106 TCEAL8Q8IYN2 117 aa33.19■■■□□ 2.9
CMTM4-202ENST00000394106 C1orf127Q8N9H9 656 aa33.19■■■□□ 2.9
CMTM4-202ENST00000394106 RDH13Q8NBN7 331 aa33.19■■■□□ 2.9
CMTM4-202ENST00000394106 ZNF560Q96MR9 790 aa33.19■■■□□ 2.9
CMTM4-202ENST00000394106 SMOC2Q9H3U7 446 aa33.19■■■□□ 2.9
CMTM4-202ENST00000394106 KIAA1586Q9HCI6 787 aa33.19■■■□□ 2.9
CMTM4-202ENST00000394106 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP33.19■■■□□ 2.9
CMTM4-202ENST00000394106 AFF4Q9UHB7 1163 aaKnown RBP33.19■■■□□ 2.9
CMTM4-202ENST00000394106 AGAP1Q9UPQ3 857 aa33.19■■■□□ 2.9
CMTM4-202ENST00000394106 TMEM221A6NGB7 291 aa33.18■■■□□ 2.9
CMTM4-202ENST00000394106 OR6C75A6NL08 312 aa33.18■■■□□ 2.9
CMTM4-202ENST00000394106 M0R296 226 aa33.18■■■□□ 2.9
CMTM4-202ENST00000394106 POU2F2P09086 479 aa33.18■■■□□ 2.9
CMTM4-202ENST00000394106 TMEM191BP0C7N4 346 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms