RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 GVINP1Q7Z2Y8 2422 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 MIA3Q5JRA6 1907 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 SPTLC1O15269 473 aa19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 LRRN2O75325 713 aa19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 TBCAO75347 108 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 MOSPD3O75425 235 aa19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 PPP1R37O75864 691 aa19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 OR4Q2P0C623 313 aa19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 SNW1Q13573 536 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 KYAT1Q16773 422 aa19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 SPATA1Q5VX52 437 aa19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 JADE1Q6IE81 842 aa19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 DYMQ7RTS9 669 aa19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 HS6ST3Q8IZP7 471 aa19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 DDX23Q9BUQ8 820 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 STRA6Q9BX79 667 aa19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 GDE1Q9NZC3 331 aa19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 STYXL1Q9Y6J8 313 aa19.83■□□□□ 0.77
PDLIM7-205ENST00000393551 DCHS1Q96JQ0 3298 aa19.83■□□□□ 0.76
PDLIM7-205ENST00000393551 PRR23AA6NEV1 266 aa19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 MYMKA6NI61 221 aa19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 NFICP08651 508 aa19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 PDCP20941 246 aa19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 FCARP24071 287 aa19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 ACOT2P49753 483 aa19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 CEBPZQ03701 1054 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 YWHAHQ04917 246 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 TANGO2Q6ICL3 276 aa19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 ZNF720Q7Z2F6 126 aa19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 SFR1Q86XK3 245 aa19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 DNAJC19Q96DA6 116 aa19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 ZSWIM3Q96MP5 696 aa19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 BACH2Q9BYV9 841 aa19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 MTMR6Q9Y217 621 aa19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 SIT1Q9Y3P8 196 aa19.82■□□□□ 0.76
PDLIM7-205ENST00000393551 A0A087X0B3 334 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 PIRO00625 290 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 ECI2O75521 394 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 CPB1P15086 417 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 ADSSP30520 456 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 LILRA4P59901 499 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 KCNA1Q09470 495 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 TWF1Q12792 350 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 SLC44A4Q53GD3 710 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 CRELD2Q6UXH1 353 aaPredicted RBP19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 PJA1Q8NG27 643 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 FAM212AQ96EL1 285 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 USP28Q96RU2 1077 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 TSPAN18Q96SJ8 248 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 STK17AQ9UEE5 414 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 MTF2Q9Y483 593 aaPredicted RBP19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 F5P12259 2224 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 FANCMQ8IYD8 2048 aa19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 EP300Q09472 2414 aaPredicted RBP19.81■□□□□ 0.76
PDLIM7-205ENST00000393551 ANO9A1A5B4 782 aa19.8■□□□□ 0.76
PDLIM7-205ENST00000393551 SHISA7A6NL88 538 aa19.8■□□□□ 0.76
PDLIM7-205ENST00000393551 EPHA5P54756 1037 aa19.8■□□□□ 0.76
PDLIM7-205ENST00000393551 MLF2Q15773 248 aaPredicted RBP19.8■□□□□ 0.76
PDLIM7-205ENST00000393551 FAM78AQ5JUQ0 283 aa19.8■□□□□ 0.76
PDLIM7-205ENST00000393551 C9orf57Q5W0N0 161 aa19.8■□□□□ 0.76
PDLIM7-205ENST00000393551 KRI1Q8N9T8 703 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-205ENST00000393551 INTS4Q96HW7 963 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-205ENST00000393551 PGLYRP2Q96PD5 576 aa19.8■□□□□ 0.76
PDLIM7-205ENST00000393551 TMEM209Q96SK2 561 aa19.8■□□□□ 0.76
PDLIM7-205ENST00000393551 LRRC3Q9BY71 257 aa19.8■□□□□ 0.76
PDLIM7-205ENST00000393551 FOXD4L1Q9NU39 408 aa19.8■□□□□ 0.76
PDLIM7-205ENST00000393551 MAFFQ9ULX9 164 aa19.8■□□□□ 0.76
PDLIM7-205ENST00000393551 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.8■□□□□ 0.76
PDLIM7-205ENST00000393551 COL4A2P08572 1712 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 DMXL1Q9Y485 3027 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 MICAL2O94851 1124 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 GJA1P17302 382 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 TYMPP19971 482 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 CD72P21854 359 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 RFX1P22670 979 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 GPR17Q13304 367 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 ADALQ6DHV7 355 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 DSTYKQ6XUX3 929 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 CD302Q8IX05 232 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 ZSWIM2Q8NEG5 633 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 ELSPBP1Q96BH3 223 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 SENP8Q96LD8 212 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 DNAJC25Q9H1X3 360 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 CCDC39Q9UFE4 941 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 AGO2Q9UKV8 859 aaKnown RBP19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 YIPF1Q9Y548 306 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 MORC2Q9Y6X9 1032 aaPredicted RBP19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 PATJQ8NI35 1801 aa19.79■□□□□ 0.76
PDLIM7-205ENST00000393551 NCANO14594 1321 aa19.78■□□□□ 0.76
PDLIM7-205ENST00000393551 TCHHQ07283 1943 aa19.78■□□□□ 0.76
PDLIM7-205ENST00000393551 KANSL1LA0AUZ9 987 aa19.78■□□□□ 0.76
PDLIM7-205ENST00000393551 XPOTO43592 962 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-205ENST00000393551 CASP5P51878 434 aa19.78■□□□□ 0.76
PDLIM7-205ENST00000393551 WNT7BP56706 349 aa19.78■□□□□ 0.76
PDLIM7-205ENST00000393551 DUSP4Q13115 394 aa19.78■□□□□ 0.76
PDLIM7-205ENST00000393551 TMEM132DQ14C87 1099 aa19.78■□□□□ 0.76
PDLIM7-205ENST00000393551 SLC39A14Q15043 492 aa19.78■□□□□ 0.76
PDLIM7-205ENST00000393551 RRAGBQ5VZM2 374 aa19.78■□□□□ 0.76
PDLIM7-205ENST00000393551 OVOS1Q6IE37 1185 aa19.78■□□□□ 0.76
PDLIM7-205ENST00000393551 PDZD4Q76G19 769 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms