RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 DHX32Q7L7V1 743 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 HPS6Q86YV9 775 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 C7orf57Q8NEG2 295 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ZSCAN18Q8TBC5 510 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 METTL6Q8TCB7 284 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 SKA1Q96BD8 255 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 NACC2Q96BF6 587 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 WNK4Q96J92 1243 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 SLC39A3Q9BRY0 314 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 DNAJC12Q9UKB3 198 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 DNM3Q9UQ16 869 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ITIH6Q6UXX5 1313 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 PTGES3LE9PB15 166 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 CNOT3O75175 753 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 SIN3BO75182 1162 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 BAG3O95817 575 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 RPN2P04844 631 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 CHMLP26374 656 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 PPARGP37231 505 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 AVPR1AP37288 418 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 TALDO1P37837 337 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 IREB2P48200 963 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 PHC1P78364 1004 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 PPARAQ07869 468 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 CUL1Q13616 776 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 KPNB1Q14974 876 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 RBM44Q6ZP01 1051 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 IKBIPQ70UQ0 350 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 COMTD1Q86VU5 262 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 COMMD2Q86X83 199 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 SYMPKQ92797 1274 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 RELTQ969Z4 430 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 CENPOQ9BU64 300 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 NUP85Q9BW27 656 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 UNKQ9C0B0 810 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 ZNF350Q9GZX5 532 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.42□□□□□ -1.86
PHF3-202ENST00000393387 UBE2TQ9NPD8 197 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 USP40Q9NVE5 1235 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 INTS10Q9NVR2 710 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 SLC52A1Q9NWF4 448 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 TLR7Q9NYK1 1049 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 CABP1Q9NZU7 370 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 CLCA2Q9UQC9 943 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 MRPS7Q9Y2R9 242 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 THRAP3Q9Y2W1 955 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 GIT1Q9Y2X7 761 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 VPS8Q8N3P4 1428 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 SCRIBQ14160 1630 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ABCC9O60706 1549 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 CCT8L1PA6NM43 557 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 RIMBP2O15034 1052 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 PQBP1O60828 265 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 FAM58BPP0C7Q3 252 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 DBTP11182 482 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 VARSP26640 1264 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 NUP107P57740 925 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 OR6B2Q6IFH4 312 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 CENPPQ6IPU0 288 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 CDC73Q6P1J9 531 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 SNX32Q86XE0 403 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 SLC44A2Q8IWA5 706 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 LRRC34Q8IZ02 419 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ZSWIM2Q8NEG5 633 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 SLC9A6Q92581 669 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 TRIM43Q96BQ3 446 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 DHTKD1Q96HY7 919 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 CHIAQ9BZP6 476 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 TRABDQ9H4I3 376 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 PRDM11Q9NQV5 511 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 SH3GLB2Q9NR46 395 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 FKBP14Q9NWM8 211 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 KLHL3Q9UH77 587 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ATPIF1Q9UII2 106 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ZNF221Q9UK13 617 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 PTBP2Q9UKA9 531 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 HPCAL4Q9UM19 191 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 HEY1Q9Y5J3 304 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 BAZ1AQ9NRL2 1556 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 FRMPD2Q68DX3 1309 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 WDR19Q8NEZ3 1342 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 PLEKHG3A1L390 1219 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 OPLAHO14841 1288 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 RGS10O43665 173 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 PPP1R37O75864 691 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 BMP10O95393 424 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 TUBG1P23258 451 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 RPS6KA3P51812 740 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ACAP2Q15057 778 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 DGUOKQ16854 277 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 PABPC1LQ4VXU2 614 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 PITRM1Q5JRX3 1037 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 EGFLAMQ63HQ2 1017 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 PDZD4Q76G19 769 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 TMC4Q7Z404 712 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ZNF557Q8N988 423 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 SPERTQ8NA61 448 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 SLC4A11Q8NBS3 891 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 RBM46Q8TBY0 533 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms