RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 SNX9Q9Y5X1 595 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 MEIS3P2A8K0S8 358 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 AKR1B15C9JRZ8 316 aaPredicted RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 H7C4K7 107 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 TEX33O43247 280 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 FERP16591 822 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 TYMPP19971 482 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 PCSK1P29120 753 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 CLCNKBP51801 687 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 SLC8A3P57103 927 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 LILRA4P59901 499 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 DEFB103AP81534 67 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 HTRA4P83105 476 aaPredicted RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 PTK2Q05397 1052 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 LRMPQ12912 555 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 CUL2Q13617 745 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 STILQ15468 1287 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 MAPRE1Q15691 268 aaKnown RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 UPP1Q16831 310 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 PAN2Q504Q3 1202 aaKnown RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 C1orf220Q5T0J3 134 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 SFMBT2Q5VUG0 894 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 PPP1R2P3Q6NXS1 205 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 UNC93AQ86WB7 457 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 COLGALT2Q8IYK4 626 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 TXLNBQ8N3L3 684 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 GSTCDQ8NEC7 633 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 OR8K1Q8NGG5 319 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 PLEKHO2Q8TD55 490 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 ZNF516Q92618 1163 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 SYN2Q92777 582 aaPredicted RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 C18orf25Q96B23 403 aaPredicted RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 GDAP2Q9NXN4 497 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 DNAJC12Q9UKB3 198 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 ADAM28Q9UKQ2 775 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 KIAA1257Q9ULG3 409 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 CAPN11Q9UMQ6 739 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 SIK3Q9Y2K2 1263 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 PRG3Q9Y2Y8 225 aaPredicted RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 CEP83Q9Y592 693 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 PCDHA11Q9Y5I1 949 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 TTC3P53804 2025 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 A0A1W2PPC1 479 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 H0YGN5 161 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 CYB561D2O14569 222 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 MED7O43513 233 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 TACC1O75410 805 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 RB1P06400 928 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 KRT5P13647 590 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 SLC9A1P19634 815 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 ANXA13P27216 316 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 KRT9P35527 623 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 PBX1P40424 430 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 USP8P40818 1118 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 PDE6CP51160 858 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 BCAR1P56945 870 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 SNX16P57768 344 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 TSPY1Q01534 308 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 ASIC2Q16515 512 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 ELMSAN1Q6PJG2 1045 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 KCNT2Q6UVM3 1135 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 C16orf59Q7L2K0 433 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 RRAGAQ7L523 313 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 GPR65Q8IYL9 337 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 TDHQ8IZJ6 230 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 CRIPAKQ8N1N5 446 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 CPLX3Q8WVH0 158 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 ZNF689Q96CS4 500 aaPredicted RBP3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 TRIM44Q96DX7 344 aaPredicted RBP3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 SENP8Q96LD8 212 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 GDF15Q99988 308 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 C11orf84Q9BUA3 381 aaPredicted RBP3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 NT5C1AQ9BXI3 368 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 NAA15Q9BXJ9 866 aaKnown RBP3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 PDCL3Q9H2J4 239 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 NRDE2Q9H7Z3 1164 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 SIX4Q9UIU6 781 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 BARX2Q9UMQ3 279 aaPredicted RBP3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 PCDHB4Q9Y5E5 795 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 ATP8B3O60423 1300 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 PTPRJQ12913 1337 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 CITO14578 2027 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 NRP1O14786 923 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 VNN1O95497 513 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 CST3P01034 146 aaPredicted RBP3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 URODP06132 367 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 GALTP07902 379 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 CASP14P31944 242 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 SOX5P35711 763 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 WNT7BP56706 349 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 YWHAHQ04917 246 aaPredicted RBP3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 UBE3AQ05086 875 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 SOX4Q06945 474 aaPredicted RBP3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 KCNMA1Q12791 1236 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 SMARCB1Q12824 385 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 DRAP1Q14919 205 aaPredicted RBP3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 ARHGAP44Q17R89 818 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 USP41Q3LFD5 358 aa3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 TDRD12Q587J7 1177 aaKnown RBP3.78□□□□□ -1.8
ATP2B1-203ENST00000393164 RASIP1Q5U651 963 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms