RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 FAM49AQ9H0Q0 323 aaPredicted RBP11.16□□□□□ -0.62
CALD1-203ENST00000393118 NGRNQ9NPE2 291 aaKnown RBP11.16□□□□□ -0.62
CALD1-203ENST00000393118 KLHL14Q9P2G3 628 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 NAV1Q8NEY1 1877 aa11.16□□□□□ -0.62
CALD1-203ENST00000393118 RASA4BC9J798 803 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 RASA4O43374 803 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 ABCD1P33897 745 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 TCF7P36402 384 aaPredicted RBP11.15□□□□□ -0.62
CALD1-203ENST00000393118 PSMC1P62191 440 aaKnown RBP11.15□□□□□ -0.62
CALD1-203ENST00000393118 GRM1Q13255 1194 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 CUL2Q13617 745 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 THEMIS2Q5TEJ8 643 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 CASC4Q6P4E1 433 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 SLC9A9Q8IVB4 645 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 C1orf131Q8NDD1 294 aaKnown RBP11.15□□□□□ -0.62
CALD1-203ENST00000393118 ATL2Q8NHH9 583 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 PRPF31Q8WWY3 499 aaKnown RBP11.15□□□□□ -0.62
CALD1-203ENST00000393118 CLEC4DQ8WXI8 215 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 SEPT1Q8WYJ6 367 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 RPS6KC1Q96S38 1066 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 PARVAQ9NVD7 372 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 BTAF1O14981 1849 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 YWHAGP61981 247 aaKnown RBP eCLIP11.15□□□□□ -0.62
CALD1-203ENST00000393118 PPATQ06203 517 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 KCNV1Q6PIU1 500 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 NIPA1Q7RTP0 329 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 ABTB1Q969K4 478 aaPredicted RBP11.15□□□□□ -0.62
CALD1-203ENST00000393118 WNK4Q96J92 1243 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 C17orf75Q9HAS0 396 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 BCORQ6W2J9 1755 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.15□□□□□ -0.62
CALD1-203ENST00000393118 TBC1D12O60347 775 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 IREB2P48200 963 aaKnown RBP11.15□□□□□ -0.62
CALD1-203ENST00000393118 ARSEP51690 589 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 SNRPFP62306 86 aaKnown RBP11.15□□□□□ -0.62
CALD1-203ENST00000393118 PDCD2Q16342 344 aaPredicted RBP11.15□□□□□ -0.62
CALD1-203ENST00000393118 P3H1Q32P28 736 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 CPNE8Q86YQ8 564 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 BSNDQ8WZ55 320 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 STAMBPL1Q96FJ0 436 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 UBXN6Q9BZV1 441 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 ATRNL1Q5VV63 1379 aa11.15□□□□□ -0.62
CALD1-203ENST00000393118 BTNL10A8MVZ5 291 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 H0Y3Z8 333 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 CES2O00748 559 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 SUN1O94901 812 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 FAM107AO95990 144 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 MAPTP10636 758 aaKnown RBP11.15□□□□□ -0.63
CALD1-203ENST00000393118 PTPRAP18433 802 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 CA4P22748 312 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 ALDH3A1P30838 453 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 FMO1Q01740 532 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 GPAT2Q6NUI2 795 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 XRRA1Q6P2D8 792 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 RDM1Q8NG50 284 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 TMC2Q8TDI7 906 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 RBM41Q96IZ5 413 aaKnown RBP11.15□□□□□ -0.63
CALD1-203ENST00000393118 SMC6Q96SB8 1091 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 TRIM7Q9C029 511 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 NOD2Q9HC29 1040 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 BATF3Q9NR55 127 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 IP6K2Q9UHH9 426 aa11.15□□□□□ -0.63
CALD1-203ENST00000393118 SPAG7O75391 227 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 TXNP10599 105 aaKnown RBP11.14□□□□□ -0.63
CALD1-203ENST00000393118 GARTP22102 1010 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 RPS12P25398 132 aaKnown RBP11.14□□□□□ -0.63
CALD1-203ENST00000393118 DSG3P32926 999 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 LAMB3Q13751 1172 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 Q3C1V9 767 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 C11orf63Q6NUN7 778 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 DPP9Q86TI2 863 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 FAM71AQ8IYT1 594 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 RAPGEF5Q92565 580 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 XPO6Q96QU8 1125 aaKnown RBP11.14□□□□□ -0.63
CALD1-203ENST00000393118 ZMYM2Q9UBW7 1377 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 SHBGP04278 402 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 CALB1P05937 261 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 AGBL2Q5U5Z8 902 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 ZBED8Q8IZ13 594 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 PRELID2Q8N945 189 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 DMAC2Q9NW81 257 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 HESX1Q9UBX0 185 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 MCM8Q9UJA3 840 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 IFI35P80217 286 aaPredicted RBP11.14□□□□□ -0.63
CALD1-203ENST00000393118 CLEC16AQ2KHT3 1053 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 TRIM72Q6ZMU5 477 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 ANKMY2Q8IV38 441 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 FAM167AQ96KS9 214 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 CFAP57Q96MR6 1250 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 RBM15Q96T37 977 aaKnown RBP eCLIP11.14□□□□□ -0.63
CALD1-203ENST00000393118 CHST7Q9NS84 486 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 MAP3K20Q9NYL2 800 aaKnown RBP11.14□□□□□ -0.63
CALD1-203ENST00000393118 L3MBTL1Q9Y468 752 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 MAD1L1Q9Y6D9 718 aa11.14□□□□□ -0.63
CALD1-203ENST00000393118 TCRBV7S2A1N4TA0A589 114 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 SLC1A1P43005 524 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 TMEM132BQ14DG7 1078 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 LY6KQ17RY6 165 aa11.13□□□□□ -0.63
CALD1-203ENST00000393118 PPP6R3Q5H9R7 873 aaPredicted RBP11.13□□□□□ -0.63
CALD1-203ENST00000393118 DARS2Q6PI48 645 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms