RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 STAG3L1P0CL83 205 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 CDC42EP1Q00587 391 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 NLRP7Q8WX94 980 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 BEGAINQ9BUH8 593 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 CISHQ9NSE2 258 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 CHORDC1Q9UHD1 332 aaPredicted RBP21.41■■□□□ 1.02
PTPN11-202ENST00000392597 MGAMO43451 1857 aa21.4■■□□□ 1.02
PTPN11-202ENST00000392597 LSM8O95777 96 aaKnown RBP21.4■■□□□ 1.02
PTPN11-202ENST00000392597 ARF4P18085 180 aaPredicted RBP21.4■■□□□ 1.02
PTPN11-202ENST00000392597 OSTNP61366 133 aa21.4■■□□□ 1.02
PTPN11-202ENST00000392597 C1QBPQ07021 282 aaKnown RBP21.4■■□□□ 1.02
PTPN11-202ENST00000392597 KIAA0319LQ8IZA0 1049 aa21.4■■□□□ 1.02
PTPN11-202ENST00000392597 KRT35Q92764 455 aa21.4■■□□□ 1.02
PTPN11-202ENST00000392597 ST7Q9NRC1 585 aa21.4■■□□□ 1.02
PTPN11-202ENST00000392597 GNEQ9Y223 722 aaKnown RBP21.4■■□□□ 1.02
PTPN11-202ENST00000392597 ADCY6O43306 1168 aa21.39■■□□□ 1.02
PTPN11-202ENST00000392597 ITGA4P13612 1032 aa21.39■■□□□ 1.02
PTPN11-202ENST00000392597 SLC1A1P43005 524 aa21.39■■□□□ 1.02
PTPN11-202ENST00000392597 CUL1Q13616 776 aa21.39■■□□□ 1.02
PTPN11-202ENST00000392597 CDR2LQ86X02 465 aaPredicted RBP21.39■■□□□ 1.02
PTPN11-202ENST00000392597 ZNF606Q8WXB4 792 aa21.39■■□□□ 1.02
PTPN11-202ENST00000392597 DDX47Q9H0S4 455 aaKnown RBP21.39■■□□□ 1.02
PTPN11-202ENST00000392597 ANAPC7Q9UJX3 599 aa21.39■■□□□ 1.02
PTPN11-202ENST00000392597 DOCK3Q8IZD9 2030 aa21.39■■□□□ 1.01
PTPN11-202ENST00000392597 H3BQF6 201 aa21.39■■□□□ 1.01
PTPN11-202ENST00000392597 F2P00734 622 aa21.39■■□□□ 1.01
PTPN11-202ENST00000392597 RRM1P23921 792 aa21.39■■□□□ 1.01
PTPN11-202ENST00000392597 ASPAP45381 313 aa21.39■■□□□ 1.01
PTPN11-202ENST00000392597 SEL1L2Q5TEA6 688 aa21.39■■□□□ 1.01
PTPN11-202ENST00000392597 SCARA3Q6AZY7 606 aa21.39■■□□□ 1.01
PTPN11-202ENST00000392597 SND1Q7KZF4 910 aaKnown RBP eCLIP21.39■■□□□ 1.01
PTPN11-202ENST00000392597 TMEM192Q8IY95 271 aa21.39■■□□□ 1.01
PTPN11-202ENST00000392597 CASKIN2Q8WXE0 1202 aa21.39■■□□□ 1.01
PTPN11-202ENST00000392597 HINFPQ9BQA5 517 aa21.39■■□□□ 1.01
PTPN11-202ENST00000392597 MRPL47Q9HD33 250 aaKnown RBP21.39■■□□□ 1.01
PTPN11-202ENST00000392597 MROH7Q68CQ1 1323 aa21.38■■□□□ 1.01
PTPN11-202ENST00000392597 LACTBL1A8MY62 500 aa21.38■■□□□ 1.01
PTPN11-202ENST00000392597 TSPAN1O60635 241 aa21.38■■□□□ 1.01
PTPN11-202ENST00000392597 ERLIN2O94905 339 aa21.38■■□□□ 1.01
PTPN11-202ENST00000392597 CARSP49589 748 aaKnown RBP21.38■■□□□ 1.01
PTPN11-202ENST00000392597 HSP90B2PQ58FF3 399 aa21.38■■□□□ 1.01
PTPN11-202ENST00000392597 WHAMMQ8TF30 809 aa21.38■■□□□ 1.01
PTPN11-202ENST00000392597 USP6NLQ92738 828 aa21.38■■□□□ 1.01
PTPN11-202ENST00000392597 BTBD6Q96KE9 485 aa21.38■■□□□ 1.01
PTPN11-202ENST00000392597 SCLT1Q96NL6 688 aa21.38■■□□□ 1.01
PTPN11-202ENST00000392597 PLVAPQ9BX97 442 aa21.38■■□□□ 1.01
PTPN11-202ENST00000392597 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.38■■□□□ 1.01
PTPN11-202ENST00000392597 WBP1LQ9NX94 342 aa21.38■■□□□ 1.01
PTPN11-202ENST00000392597 ADAM22Q9P0K1 906 aa21.38■■□□□ 1.01
PTPN11-202ENST00000392597 SCINQ9Y6U3 715 aa21.38■■□□□ 1.01
PTPN11-202ENST00000392597 NRCAMQ92823 1304 aa21.38■■□□□ 1.01
PTPN11-202ENST00000392597 A0A1B0GUA9 196 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 ATICP31939 592 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 MARCKSL1P49006 195 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 RWDD2BP57060 319 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 ZNF211Q13398 564 aaPredicted RBP21.37■■□□□ 1.01
PTPN11-202ENST00000392597 PCBP1Q15365 356 aaKnown RBP eCLIP21.37■■□□□ 1.01
PTPN11-202ENST00000392597 NT5DC4Q86YG4 428 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 FAM71BQ8TC56 605 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 ADPGKQ9BRR6 497 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 ZNF518BQ9C0D4 1074 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 VRTNQ9H8Y1 702 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 SIX4Q9UIU6 781 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 ZSCAN5CA6NGD5 496 aaPredicted RBP21.37■■□□□ 1.01
PTPN11-202ENST00000392597 MYO1FO00160 1098 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 DYNC1LI2O43237 492 aaPredicted RBP21.37■■□□□ 1.01
PTPN11-202ENST00000392597 CSDE1O75534 798 aaKnown RBP21.37■■□□□ 1.01
PTPN11-202ENST00000392597 CFHP08603 1231 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 NFICP08651 508 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 PTP4A2Q12974 167 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 OLFML2BQ68BL8 750 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 PLEKHA7Q6IQ23 1121 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 APBB1IPQ7Z5R6 666 aaPredicted RBP21.37■■□□□ 1.01
PTPN11-202ENST00000392597 C1orf127Q8N9H9 656 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 SEC14L1Q92503 715 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 CPB2Q96IY4 423 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 PPP1R16BQ96T49 567 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 BCO2Q9BYV7 579 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 NFU1Q9UMS0 254 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 PCDHGC3Q9UN70 934 aa21.37■■□□□ 1.01
PTPN11-202ENST00000392597 ZNF865P0CJ78 1059 aaPredicted RBP21.36■■□□□ 1.01
PTPN11-202ENST00000392597 DCAF4L1Q3SXM0 396 aa21.36■■□□□ 1.01
PTPN11-202ENST00000392597 ZNF667Q5HYK9 610 aa21.36■■□□□ 1.01
PTPN11-202ENST00000392597 JADE1Q6IE81 842 aa21.36■■□□□ 1.01
PTPN11-202ENST00000392597 CD302Q8IX05 232 aa21.36■■□□□ 1.01
PTPN11-202ENST00000392597 MREGQ8N565 214 aa21.36■■□□□ 1.01
PTPN11-202ENST00000392597 IFT81Q8WYA0 676 aa21.36■■□□□ 1.01
PTPN11-202ENST00000392597 C11orf70Q9BRQ4 267 aa21.36■■□□□ 1.01
PTPN11-202ENST00000392597 ADAMTS10Q9H324 1103 aa21.36■■□□□ 1.01
PTPN11-202ENST00000392597 FAM124BQ9H5Z6 455 aaPredicted RBP21.36■■□□□ 1.01
PTPN11-202ENST00000392597 AMACRQ9UHK6 382 aa21.36■■□□□ 1.01
PTPN11-202ENST00000392597 LCMT1Q9UIC8 334 aa21.36■■□□□ 1.01
PTPN11-202ENST00000392597 C2CD2Q9Y426 696 aa21.36■■□□□ 1.01
PTPN11-202ENST00000392597 ESYT3A0FGR9 886 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 MBLAC1A4D2B0 266 aaPredicted RBP21.35■■□□□ 1.01
PTPN11-202ENST00000392597 MEFVO15553 781 aaPredicted RBP21.35■■□□□ 1.01
PTPN11-202ENST00000392597 CD58P19256 250 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 MMP8P22894 467 aa21.35■■□□□ 1.01
PTPN11-202ENST00000392597 CDH5P33151 784 aaPredicted RBP21.35■■□□□ 1.01
PTPN11-202ENST00000392597 DHX34Q14147 1143 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms