RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 RAB6BQ9NRW1 208 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 TBC1D22BQ9NU19 505 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 PCMTD2Q9NV79 361 aa13.84□□□□□ -0.19
TRAPPC9-201ENST00000389328 UNC5CO95185 931 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 MYL2P10916 166 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 SERPINB3P29508 390 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 CACNA2D1P54289 1103 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 PSMC5P62195 406 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 ROR1Q01973 937 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 SPOPLQ6IQ16 392 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 LINC00116Q8NCU8 138 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 MCPH1Q8NEM0 835 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 SLCO1B3Q9NPD5 702 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 NRBP2Q9NSY0 501 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 AGO2Q9UKV8 859 aaKnown RBP13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 NKRFO15226 690 aaKnown RBP eCLIP13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 CNGA1P29973 690 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 SLC12A3P55017 1021 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 RBBP8NLQ8NC74 664 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 SPIRE2Q8WWL2 714 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 ZNF341Q9BYN7 854 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 MIS12Q9H081 205 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 TMEM8AQ9HCN3 771 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 TOPORSQ9NS56 1045 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 MON2Q7Z3U7 1717 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 SLC26A4O43511 780 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 PSAPP07602 524 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 WEE2P0C1S8 567 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 STX3Q13277 289 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 CYTH1Q15438 398 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 TAS1R2Q8TE23 839 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 SHISA4Q96DD7 197 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 ATXN7L3BQ96GX2 97 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 HIC2Q96JB3 615 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 KIAA1683Q9H0B3 1180 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 SLC12A6Q9UHW9 1150 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 TLK1Q9UKI8 766 aa13.83□□□□□ -0.2
TRAPPC9-201ENST00000389328 P4HA2O15460 535 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 JAK3P52333 1124 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 BCAR1P56945 870 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 BTKQ06187 659 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 DNAL1Q4LDG9 190 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 LACTB2Q53H82 288 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 SLC27A3Q5K4L6 730 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 OLFML2BQ68BL8 750 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 SLFN12LQ6IEE8 588 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 C1orf131Q8NDD1 294 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 MCUQ8NE86 351 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 TMEM121Q9BTD3 319 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 KIAA1586Q9HCI6 787 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 DDX56Q9NY93 547 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 FAM208AQ9UK61 1670 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 PIK3R2O00459 728 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 HNRNPCP07910 306 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 KRT3P12035 628 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 CHKAP35790 457 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 MTFR1Q15390 333 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 EEPD1Q7L9B9 569 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 PPP1R16BQ96T49 567 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 PAGR1Q9BTK6 254 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 TBC1D10AQ9BXI6 508 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 KCTD10Q9H3F6 313 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 BTNL10A8MVZ5 291 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 TISP43B9A030 160 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 FAM86B1E9PN63 330 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 RAD17O75943 681 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 GH1P01241 217 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 HLA-DRAP01903 254 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 FAM86B2P0C5J1 330 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 TBXAS1P24557 533 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 CHI3L2Q15782 390 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 GRIK5Q16478 980 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 ZNF699Q32M78 642 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 SPDYCQ5MJ68 293 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 DAB2IPQ5VWQ8 1189 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 SLC25A41Q8N5S1 370 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 OLFML3Q9NRN5 406 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 NYAP2Q9P242 653 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 ZC3H7BQ9UGR2 993 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 PCDHA3Q9Y5H8 950 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 E2F8A0AVK6 867 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 TRIM49D1C9J1S8 452 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 PIAS1O75925 651 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 GSTA2P09210 222 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 RBP3P10745 1247 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 ATP4AP20648 1035 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 IZUMO2Q6UXV1 221 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 PRUNE1Q86TP1 453 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 FAM71DQ8N9W8 422 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 PRPF31Q8WWY3 499 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 POLR3FQ9H1D9 316 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 ZNF711Q9Y462 761 aa13.82□□□□□ -0.2
TRAPPC9-201ENST00000389328 XRN1Q8IZH2 1706 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 LMTK3Q96Q04 1460 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 ATP6V1B1P15313 513 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 NFIAQ12857 509 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 CNGA3Q16281 694 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 FSCBQ5H9T9 825 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 MIS18BP1Q6P0N0 1132 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 SCG3Q8WXD2 468 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms