RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 ZBBXA8MT70 800 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 HUS1O60921 280 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 GNAT1P11488 350 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 CPA2P48052 419 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 TMEM35BQ8NCS4 154 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 ERGIC2Q96RQ1 377 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 KIAA1586Q9HCI6 787 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 SAYSD1Q9NPB0 183 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 HEY1Q9Y5J3 304 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 GBP7Q8N8V2 638 aaPredicted RBP19.92■□□□□ 0.78
CSPG5-202ENST00000383738 TAS1R2Q8TE23 839 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 HAO1Q9UJM8 370 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 ZNF142P52746 1687 aaPredicted RBP19.91■□□□□ 0.78
CSPG5-202ENST00000383738 CFAP73A6NFT4 308 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 A6NJR5 290 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 PSMC4P43686 418 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 GPC5P78333 572 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 ISLR2Q6UXK2 745 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 VSIG10LQ86VR7 867 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 SIX6OS1Q8N1H7 587 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 KCTD6Q8NC69 237 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 VCX3BQ9H321 246 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 TRIM33Q9UPN9 1127 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 RASSF10A6NK89 507 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 SLC4A1P02730 911 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 ZCCHC18P0CG32 403 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 EFNA5P52803 228 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 PSMC1P62191 440 aaKnown RBP19.91■□□□□ 0.78
CSPG5-202ENST00000383738 AGAP11Q8TF27 550 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 ANKEF1Q9NU02 776 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 COL20A1Q9P218 1284 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 I3L4J1 428 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 HBP1O60381 514 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 MXD4Q14582 209 aaPredicted RBP19.91■□□□□ 0.78
CSPG5-202ENST00000383738 DGKDQ16760 1214 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 ARHGAP24Q8N264 748 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 ZNF564Q8TBZ8 553 aaPredicted RBP19.91■□□□□ 0.78
CSPG5-202ENST00000383738 CCDC124Q96CT7 223 aaKnown RBP19.91■□□□□ 0.78
CSPG5-202ENST00000383738 MTMR12Q9C0I1 747 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 JAMLQ86YT9 394 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 TNFRSF25Q93038 417 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 C18orf8Q96DM3 657 aa19.91■□□□□ 0.78
CSPG5-202ENST00000383738 SDK1Q7Z5N4 2213 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 CXCL11O14625 94 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 PPATQ06203 517 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 ARHGEF6Q15052 776 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 NPY5RQ15761 445 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 PREPLQ4J6C6 727 aaPredicted RBP19.9■□□□□ 0.78
CSPG5-202ENST00000383738 ZFP69BQ9UJL9 534 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 IGSF9BQ9UPX0 1349 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 SSU72P8A0A1W2PR75 194 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 DNM1LO00429 736 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 BNIP3LO60238 219 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 ARMC3Q5W041 872 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 TRIM59Q8IWR1 403 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 CEP70Q8NHQ1 597 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 TEKT4Q8WW24 435 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 SPIRE2Q8WWL2 714 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 DDX27Q96GQ7 796 aaKnown RBP19.9■□□□□ 0.78
CSPG5-202ENST00000383738 TMEM237Q96Q45 408 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 MRPL47Q9HD33 250 aaKnown RBP19.9■□□□□ 0.78
CSPG5-202ENST00000383738 ZNF263O14978 683 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 MAP3K7O43318 606 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 NQO1P15559 274 aaKnown RBP19.9■□□□□ 0.78
CSPG5-202ENST00000383738 YWHAGP61981 247 aaKnown RBP eCLIP19.9■□□□□ 0.78
CSPG5-202ENST00000383738 BASP1P80723 227 aaKnown RBP19.9■□□□□ 0.78
CSPG5-202ENST00000383738 ACSF2Q96CM8 615 aaPredicted RBP19.9■□□□□ 0.78
CSPG5-202ENST00000383738 BTBD6Q96KE9 485 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 FAM161BQ96MY7 647 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 AGPAT1Q99943 283 aa19.9■□□□□ 0.78
CSPG5-202ENST00000383738 UBE4BO95155 1302 aa19.89■□□□□ 0.78
CSPG5-202ENST00000383738 USP2O75604 605 aaPredicted RBP19.89■□□□□ 0.78
CSPG5-202ENST00000383738 NPTXRO95502 500 aa19.89■□□□□ 0.78
CSPG5-202ENST00000383738 FLT3P36888 993 aa19.89■□□□□ 0.78
CSPG5-202ENST00000383738 SERPINB4P48594 390 aa19.89■□□□□ 0.78
CSPG5-202ENST00000383738 NOP14P78316 857 aaKnown RBP19.89■□□□□ 0.78
CSPG5-202ENST00000383738 LAMC2Q13753 1193 aa19.89■□□□□ 0.78
CSPG5-202ENST00000383738 UGCGQ16739 394 aa19.89■□□□□ 0.78
CSPG5-202ENST00000383738 BBS9Q3SYG4 887 aa19.89■□□□□ 0.78
CSPG5-202ENST00000383738 MOXD1Q6UVY6 613 aa19.89■□□□□ 0.78
CSPG5-202ENST00000383738 IRF2BP1Q8IU81 584 aa19.89■□□□□ 0.78
CSPG5-202ENST00000383738 UBA3Q8TBC4 463 aa19.89■□□□□ 0.78
CSPG5-202ENST00000383738 ARL2BPQ9Y2Y0 163 aa19.89■□□□□ 0.78
CSPG5-202ENST00000383738 UBA1P22314 1058 aaKnown RBP19.89■□□□□ 0.77
CSPG5-202ENST00000383738 EPHB1P54762 984 aa19.89■□□□□ 0.77
CSPG5-202ENST00000383738 GRAMD1BQ3KR37 738 aa19.89■□□□□ 0.77
CSPG5-202ENST00000383738 CAVIN3Q969G5 261 aa19.89■□□□□ 0.77
CSPG5-202ENST00000383738 FGD4Q96M96 766 aa19.89■□□□□ 0.77
CSPG5-202ENST00000383738 MROH8Q9H579 483 aa19.89■□□□□ 0.77
CSPG5-202ENST00000383738 PRG3Q9Y2Y8 225 aaPredicted RBP19.89■□□□□ 0.77
CSPG5-202ENST00000383738 ELF3P78545 371 aaPredicted RBP19.89■□□□□ 0.77
CSPG5-202ENST00000383738 SKOR1P84550 965 aa19.89■□□□□ 0.77
CSPG5-202ENST00000383738 OVGP1Q12889 678 aa19.89■□□□□ 0.77
CSPG5-202ENST00000383738 MAP7Q14244 749 aa19.89■□□□□ 0.77
CSPG5-202ENST00000383738 METTL23Q86XA0 190 aa19.89■□□□□ 0.77
CSPG5-202ENST00000383738 ZBED2Q9BTP6 218 aa19.89■□□□□ 0.77
CSPG5-202ENST00000383738 PORCNQ9H237 461 aa19.89■□□□□ 0.77
CSPG5-202ENST00000383738 VPS33BQ9H267 617 aa19.89■□□□□ 0.77
CSPG5-202ENST00000383738 SLITRK6Q9H5Y7 841 aa19.89■□□□□ 0.77
CSPG5-202ENST00000383738 NPHS2Q9NP85 383 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms