RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 RALGDSQ12967 914 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 HIST2H2ACQ16777 129 aaPredicted RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 KNOP1Q1ED39 458 aaKnown RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 HIST2H2AA3Q6FI13 130 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 TRIM65Q6PJ69 517 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 TRIM72Q6ZMU5 477 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 MACC1Q6ZN28 852 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 GPR141Q7Z602 305 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 ZMYND8Q9ULU4 1186 aaPredicted RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 B2RBV5 119 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 TRIM24O15164 1050 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 ATP1A1P05023 1023 aaKnown RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 MYBP10242 640 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 MRPS35P82673 323 aaKnown RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 ZNF200P98182 395 aaPredicted RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 DDX39BQ13838 428 aaKnown RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 ZSWIM7Q19AV6 140 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 SGSM1Q2NKQ1 1148 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 DGKKQ5KSL6 1271 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 TYW3Q6IPR3 259 aaKnown RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 BTN2A1Q7KYR7 527 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 CENPLQ8N0S6 344 aaPredicted RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 DNAJC9Q8WXX5 260 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 GPR101Q96P66 508 aaPredicted RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 SHCBP1LQ9BZQ2 653 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 RPRD1BQ9NQG5 326 aaKnown RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 CYP39A1Q9NYL5 469 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 SH3BP1Q9Y3L3 701 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 TRIM43BA6NCK2 446 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 POTECB2RU33 542 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 GGPS1O95749 300 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 HOXA7P31268 230 aaPredicted RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 CRKLP46109 303 aaKnown RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 TTLL4Q14679 1199 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 CYP51A1Q16850 503 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 ZNF618Q5T7W0 954 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 LMBRD2Q68DH5 695 aaPredicted RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 SNRNP48Q6IEG0 339 aaKnown RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 PROM2Q8N271 834 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 IPMKQ8NFU5 416 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 FAM45AQ8TCE6 357 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 ROGDIQ9GZN7 287 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 FANCEQ9HB96 536 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 AVENQ9NQS1 362 aaPredicted RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 CFAP99D6REC4 459 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 TALDO1P37837 337 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 RGS2P41220 211 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 DUOXA2Q1HG44 320 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 PGS1Q32NB8 556 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 IZUMO1Q8IYV9 350 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 SLC30A5Q8TAD4 765 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 SSH3Q8TE77 659 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 ZNF473Q8WTR7 871 aaKnown RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 ADAM30Q9UKF2 790 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 ATF5Q9Y2D1 282 aaPredicted RBP6.13□□□□□ -1.43
RFX3-204ENST00000382004 PCDHGA4Q9Y5G9 962 aa6.13□□□□□ -1.43
RFX3-204ENST00000382004 PLB1Q6P1J6 1458 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 EMSYQ7Z589 1322 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 BLMP54132 1417 aaPredicted RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 LOC100653049A0A140TA62 436 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 KRT34O76011 436 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 STAT3P40763 770 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 MTM1Q13496 603 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 KRR1Q13601 381 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 DHX34Q14147 1143 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 NLGN1Q8N2Q7 840 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 AGGF1Q8N302 714 aaeCLIP6.12□□□□□ -1.43
RFX3-204ENST00000382004 RSPH1Q8WYR4 309 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 RAD54LQ92698 747 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 MAP4K1Q92918 833 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 SEPT5Q99719 369 aaPredicted RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 ANTXR1Q9H6X2 564 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 HERC5Q9UII4 1024 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 SLC25A13Q9UJS0 675 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 TMA7Q9Y2S6 64 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 PITPNM2Q9BZ72 1349 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 POTEIP0CG38 1075 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 SARSP49591 514 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 NDUFA5Q16718 116 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 RESP18Q5W5W9 173 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 POTEGQ6S5H5 508 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 LRRC8DQ7L1W4 858 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 BHMTQ93088 406 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 RIC8BQ9NVN3 520 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 RCOR1Q9UKL0 485 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 TMCC3Q9ULS5 477 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 HEATR9A2RTY3 570 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 GPR1P46091 355 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 CACNB3P54284 484 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 PTK7Q13308 1070 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 AP3B2Q13367 1082 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 GALNTL6Q49A17 601 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 DENND6AQ8IWF6 608 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.12□□□□□ -1.43
RFX3-204ENST00000382004 TRIM63Q969Q1 353 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 MRPL48Q96GC5 212 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 TNIP3Q96KP6 325 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 MYLK2Q9H1R3 596 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 WWOXQ9NZC7 414 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms