RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 KLHL14Q9P2G3 628 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 APEX2Q9UBZ4 518 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 KCNG1Q9UIX4 513 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 DNAJC12Q9UKB3 198 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 DNAJC25-GNG10A0A024R161 153 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 TMEM120BA0PK00 339 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 DENND3A2RUS2 1198 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 TCEA3O75764 348 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 KRT16P08779 473 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 TRIM49P0CI25 452 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 TRIM49CP0CI26 452 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 FGFR4P22455 802 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 ABCD1P33897 745 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 MYL7Q01449 175 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 ZNF211Q13398 564 aaPredicted RBP9.51□□□□□ -0.89
GPNMB-202ENST00000381990 Q3C1V9 767 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 MTERF2Q49AM1 385 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 CMPK2Q5EBM0 449 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 ARHGEF18Q6ZSZ5 1173 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 ADAT2Q7Z6V5 191 aaKnown RBP9.51□□□□□ -0.89
GPNMB-202ENST00000381990 RDH13Q8NBN7 331 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 ZNF483Q8TF39 744 aaPredicted RBP9.51□□□□□ -0.89
GPNMB-202ENST00000381990 ZNF526Q8TF50 670 aaPredicted RBP9.51□□□□□ -0.89
GPNMB-202ENST00000381990 THAP2Q9H0W7 228 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 R3HDMLQ9H3Y0 253 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 PCIF1Q9H4Z3 704 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 WHRNQ9P202 907 aa9.51□□□□□ -0.89
GPNMB-202ENST00000381990 GSTTP1A0A1W2PQM5 241 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 H0YCG3 227 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 ECM2O94769 699 aaPredicted RBP9.5□□□□□ -0.89
GPNMB-202ENST00000381990 MTA2O94776 668 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 UNC5CO95185 931 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 ATP4AP20648 1035 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 SLCO1A2P46721 670 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 VAMP7P51809 220 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 PARP6Q2NL67 630 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 CBWD6Q4V339 395 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 CBWD3Q5JTY5 395 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 CBWD5Q5RIA9 395 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 NAIF1Q69YI7 327 aaPredicted RBP9.5□□□□□ -0.89
GPNMB-202ENST00000381990 GJB7Q6PEY0 223 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 CCDC105Q8IYK2 499 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 SHCBP1Q8NEM2 672 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 GTF3C2Q8WUA4 911 aaPredicted RBP9.5□□□□□ -0.89
GPNMB-202ENST00000381990 ARHGEF26Q96DR7 871 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 FGD4Q96M96 766 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 MMP19Q99542 508 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 SH3GL3Q99963 347 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 PLVAPQ9BX97 442 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 SLC24A3Q9HC58 644 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 PNMA3Q9UL41 463 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 CLEC11AQ9Y240 323 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 ACTL7BQ9Y614 415 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 P4HA2O15460 535 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 PGK2P07205 417 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 CNGA1P29973 690 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 COILP38432 576 aaPredicted RBP9.5□□□□□ -0.89
GPNMB-202ENST00000381990 CCNHP51946 323 aaPredicted RBP9.5□□□□□ -0.89
GPNMB-202ENST00000381990 POLGP54098 1239 aaPredicted RBP9.5□□□□□ -0.89
GPNMB-202ENST00000381990 SOX10P56693 466 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 MCCD1P59942 119 aaPredicted RBP9.5□□□□□ -0.89
GPNMB-202ENST00000381990 EMC2Q15006 297 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 CCDC38Q502W7 563 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 FAM160B1Q5W0V3 765 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 METTL7BQ6UX53 244 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 PPP1R21Q6ZMI0 780 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 SYDE1Q6ZW31 735 aaPredicted RBP9.5□□□□□ -0.89
GPNMB-202ENST00000381990 KIRREL3Q8IZU9 778 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 FITM2Q8N6M3 262 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 MICAL1Q8TDZ2 1067 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 MAGEB18Q96M61 343 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 KIFC3Q9BVG8 833 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 NIFKQ9BYG3 293 aaKnown RBP9.5□□□□□ -0.89
GPNMB-202ENST00000381990 GPR88Q9GZN0 384 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 INTS2Q9H0H0 1204 aaKnown RBP9.5□□□□□ -0.89
GPNMB-202ENST00000381990 POLR3FQ9H1D9 316 aaPredicted RBP9.5□□□□□ -0.89
GPNMB-202ENST00000381990 ADAM22Q9P0K1 906 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 COG5Q9UP83 839 aa9.5□□□□□ -0.89
GPNMB-202ENST00000381990 ZNFX1Q9P2E3 1918 aaKnown RBP9.49□□□□□ -0.89
GPNMB-202ENST00000381990 ANKRD63C9JTQ0 380 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 SOCS7O14512 581 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 ECEL1O95672 775 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 MAN1A1P33908 653 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 PEX5P50542 639 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 GPC5P78333 572 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 CAV1Q03135 178 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 CHADLQ6NUI6 762 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 TTC27Q6P3X3 843 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 ERICH1Q86X53 443 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 CFAP61Q8NHU2 1237 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 SEPT1Q8WYJ6 367 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 DHX33Q9H6R0 707 aaKnown RBP9.49□□□□□ -0.89
GPNMB-202ENST00000381990 LRRC19Q9H756 370 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 ARHGAP28Q9P2N2 729 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 ADGRA3Q8IWK6 1321 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 ITIH2P19823 946 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 ADSSP30520 456 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 CETN1Q12798 172 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 STRN3Q13033 797 aa9.49□□□□□ -0.89
GPNMB-202ENST00000381990 MTFR1Q15390 333 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms