RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 E2F8A0AVK6 867 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 CCT8L1PA6NM43 557 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 GOLGA8CPA6NN73 597 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 EXTL3O43909 919 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 SLURP2P0DP57 97 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 CAP2P40123 477 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 RBP5P82980 135 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 CACNB2Q08289 660 aaPredicted RBP18.04■□□□□ 0.48
SGCB-201ENST00000381431 FOXD4Q12950 439 aaPredicted RBP18.04■□□□□ 0.48
SGCB-201ENST00000381431 FAXCQ5TGI0 409 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 MEI1Q5TIA1 1274 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 TSSK1BQ9BXA7 367 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 OSBPL1AQ9BXW6 950 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 FAM86B1E9PN63 330 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 LMNAP02545 664 aaKnown RBP18.04■□□□□ 0.48
SGCB-201ENST00000381431 FAM86B2P0C5J1 330 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 PGM1P36871 562 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 KCNT1Q5JUK3 1230 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 ACAD11Q709F0 780 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 RAPGEF5Q92565 580 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 PSMC3IPQ9P2W1 217 aaPredicted RBP18.04■□□□□ 0.48
SGCB-201ENST00000381431 RAB21Q9UL25 225 aa18.04■□□□□ 0.48
SGCB-201ENST00000381431 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.04■□□□□ 0.48
SGCB-201ENST00000381431 ARHGEF37A1IGU5 675 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 SPDYE2BA6NHP3 402 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 ICAM1P05362 532 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 ENO1P06733 434 aaKnown RBP18.03■□□□□ 0.48
SGCB-201ENST00000381431 SPDYE6P0CI01 402 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 ALDH18A1P54886 795 aaKnown RBP18.03■□□□□ 0.48
SGCB-201ENST00000381431 ESRRGP62508 458 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 YWHAHQ04917 246 aaPredicted RBP18.03■□□□□ 0.48
SGCB-201ENST00000381431 MYOZ2Q9NPC6 264 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 ZNF446Q9NWS9 450 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 WNT7AO00755 349 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 XPAP23025 273 aaPredicted RBP18.03■□□□□ 0.48
SGCB-201ENST00000381431 TMEM132DQ14C87 1099 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 TMEM259Q4ZIN3 620 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 FASTKD1Q53R41 847 aaKnown RBP18.03■□□□□ 0.48
SGCB-201ENST00000381431 SLC47A2Q86VL8 602 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 FAM71DQ8N9W8 422 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 SUDS3Q9H7L9 328 aaPredicted RBP18.03■□□□□ 0.48
SGCB-201ENST00000381431 GMPSP49915 693 aaPredicted RBP18.03■□□□□ 0.48
SGCB-201ENST00000381431 ATF7IP2Q5U623 682 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 TTC39CQ8N584 583 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 KCTD17Q8N5Z5 321 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 H3BRJ5 948 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 MAFGO15525 162 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 TAC1P20366 129 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 KCNA1Q09470 495 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 DRP2Q13474 957 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.03■□□□□ 0.48
SGCB-201ENST00000381431 SPATA31D1Q6ZQQ2 1576 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 SV2AQ7L0J3 742 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 ARHGEF26Q96DR7 871 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 SPON2Q9BUD6 331 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 ROPN1BQ9BZX4 212 aaPredicted RBP18.03■□□□□ 0.48
SGCB-201ENST00000381431 ROPN1Q9HAT0 212 aaPredicted RBP18.03■□□□□ 0.48
SGCB-201ENST00000381431 ADA2Q9NZK5 511 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 USP20Q9Y2K6 914 aa18.03■□□□□ 0.48
SGCB-201ENST00000381431 ATP8B3O60423 1300 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 TNS2Q63HR2 1409 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 TMEM150BA6NC51 233 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 C19orf81C9J6K1 198 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 ASAP2O43150 1006 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 FAM153BP0C7A2 387 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 PAMP19021 973 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 FAM153CQ494X1 144 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 LVRNQ6Q4G3 990 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 KDM7AQ6ZMT4 941 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 SLC35C1Q96A29 364 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 WWP1Q9H0M0 922 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 FAM153AQ9UHL3 310 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 ZNF200P98182 395 aaPredicted RBP18.02■□□□□ 0.48
SGCB-201ENST00000381431 MORF4L2Q15014 288 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 LRRC36Q1X8D7 754 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 TRIML2Q8N7C3 387 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 RBM46Q8TBY0 533 aaKnown RBP18.02■□□□□ 0.48
SGCB-201ENST00000381431 CCDC138Q96M89 665 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 BEGAINQ9BUH8 593 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 MRPL46Q9H2W6 279 aaKnown RBP18.02■□□□□ 0.48
SGCB-201ENST00000381431 SEMA4AQ9H3S1 761 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 PCMTD2Q9NV79 361 aa18.02■□□□□ 0.48
SGCB-201ENST00000381431 FAM237AA0A1B0GTK4 181 aa18.02■□□□□ 0.47
SGCB-201ENST00000381431 PDE2AO00408 941 aaPredicted RBP18.02■□□□□ 0.47
SGCB-201ENST00000381431 DYNC1LI2O43237 492 aaPredicted RBP18.02■□□□□ 0.47
SGCB-201ENST00000381431 CUL2Q13617 745 aa18.02■□□□□ 0.47
SGCB-201ENST00000381431 CLMNQ96JQ2 1002 aa18.02■□□□□ 0.47
SGCB-201ENST00000381431 TSC22D3Q99576 134 aa18.02■□□□□ 0.47
SGCB-201ENST00000381431 SMARCAD1Q9H4L7 1026 aa18.02■□□□□ 0.47
SGCB-201ENST00000381431 KIF9Q9HAQ2 790 aa18.02■□□□□ 0.47
SGCB-201ENST00000381431 PAPOLAP51003 745 aaKnown RBP18.01■□□□□ 0.47
SGCB-201ENST00000381431 PTK7Q13308 1070 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.01■□□□□ 0.47
SGCB-201ENST00000381431 TNIP3Q96KP6 325 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 FNTAP49354 379 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 NSUN2Q08J23 767 aaKnown RBP eCLIP18.01■□□□□ 0.47
SGCB-201ENST00000381431 EFCAB12Q6NXP0 572 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 ZFPM1Q8IX07 1006 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 ACTRT1Q8TDG2 376 aa18.01■□□□□ 0.47
SGCB-201ENST00000381431 SARS2Q9NP81 518 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms