RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 FAM81BQ96LP2 452 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 CCDC114Q96M63 670 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 CCT8L2Q96SF2 557 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 DDX47Q9H0S4 455 aaKnown RBP15.21■□□□□ 0.03
CLCN4-201ENST00000380829 RRAGCQ9HB90 399 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 PCDHB4Q9Y5E5 795 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 PCDHB2Q9Y5E7 798 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 ACKR2O00590 384 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 STRNO43815 780 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 CLTAP09496 248 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 MARCKSL1P49006 195 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 PTENP60484 403 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 MBTD1Q05BQ5 628 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 TRADDQ15628 312 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 C2CD6Q53TS8 623 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 ACAD10Q6JQN1 1059 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 C11orf63Q6NUN7 778 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 TSHZ1Q6ZSZ6 1077 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 ADAT2Q7Z6V5 191 aaKnown RBP15.21■□□□□ 0.02
CLCN4-201ENST00000380829 PHLDB2Q86SQ0 1253 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 C2orf69Q8N8R5 385 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 PPTC7Q8NI37 304 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 RUBCNQ92622 972 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 KRT35Q92764 455 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 FZD8Q9H461 694 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 CPSF3Q9UKF6 684 aaKnown RBP15.21■□□□□ 0.02
CLCN4-201ENST00000380829 GTF3C4Q9UKN8 822 aa15.21■□□□□ 0.02
CLCN4-201ENST00000380829 TPX2Q9ULW0 747 aaKnown RBP15.21■□□□□ 0.02
CLCN4-201ENST00000380829 E7EVH7 732 aa15.2■□□□□ 0.02
CLCN4-201ENST00000380829 ATP2C2O75185 946 aa15.2■□□□□ 0.02
CLCN4-201ENST00000380829 CYP1A2P05177 515 aa15.2■□□□□ 0.02
CLCN4-201ENST00000380829 CFHP08603 1231 aa15.2■□□□□ 0.02
CLCN4-201ENST00000380829 COMTP21964 271 aa15.2■□□□□ 0.02
CLCN4-201ENST00000380829 CARSP49589 748 aaKnown RBP15.2■□□□□ 0.02
CLCN4-201ENST00000380829 AADACL2Q6P093 401 aa15.2■□□□□ 0.02
CLCN4-201ENST00000380829 MPZL3Q6UWV2 235 aa15.2■□□□□ 0.02
CLCN4-201ENST00000380829 WDR49Q8IV35 697 aa15.2■□□□□ 0.02
CLCN4-201ENST00000380829 PASD1Q8IV76 773 aa15.2■□□□□ 0.02
CLCN4-201ENST00000380829 ABRAQ8N0Z2 381 aa15.2■□□□□ 0.02
CLCN4-201ENST00000380829 IFT81Q8WYA0 676 aa15.2■□□□□ 0.02
CLCN4-201ENST00000380829 CNOT8Q9UFF9 292 aaKnown RBP15.2■□□□□ 0.02
CLCN4-201ENST00000380829 UNGP13051 313 aaPredicted RBP15.19■□□□□ 0.02
CLCN4-201ENST00000380829 PROZP22891 400 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 TFAMQ00059 246 aaKnown RBP15.19■□□□□ 0.02
CLCN4-201ENST00000380829 GRB14Q14449 540 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 TCEAL1Q15170 157 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 C11orf91Q3C1V1 193 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 TMEM192Q8IY95 271 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 MAML3Q96JK9 1138 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 PARK7Q99497 189 aaKnown RBP15.19■□□□□ 0.02
CLCN4-201ENST00000380829 IMPG2Q9BZV3 1241 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 IFT122Q9HBG6 1241 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 PTPRHQ9HD43 1115 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 GDF3Q9NR23 364 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 AKT3Q9Y243 479 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 EME2A4GXA9 379 aaPredicted RBP15.19■□□□□ 0.02
CLCN4-201ENST00000380829 SART1O43290 800 aaKnown RBP15.19■□□□□ 0.02
CLCN4-201ENST00000380829 VTNP04004 478 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 EPHB4P54760 987 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 MYL6P60660 151 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 FKBP1BP68106 108 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 ZNF484Q5JVG2 852 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 LLGL2Q6P1M3 1020 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 KDM7AQ6ZMT4 941 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 IFT20Q8IY31 132 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 FUKQ8N0W3 1084 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 CYFIP2Q96F07 1278 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 CALR3Q96L12 384 aaKnown RBP15.19■□□□□ 0.02
CLCN4-201ENST00000380829 C16orf70Q9BSU1 422 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 NFU1Q9UMS0 254 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 NR2E1Q9Y466 385 aa15.19■□□□□ 0.02
CLCN4-201ENST00000380829 A0A087WZ62 844 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 RBM47A0AV96 593 aaKnown RBP15.18■□□□□ 0.02
CLCN4-201ENST00000380829 MTA2O94776 668 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 HOXC6P09630 235 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 SMPD1P17405 629 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 NR1D1P20393 614 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 GNA15P30679 374 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 ZNF467Q7Z7K2 595 aaPredicted RBP15.18■□□□□ 0.02
CLCN4-201ENST00000380829 RBBP8NLQ8NC74 664 aaPredicted RBP15.18■□□□□ 0.02
CLCN4-201ENST00000380829 CASKIN2Q8WXE0 1202 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 FDXACB1Q9BRP7 624 aaPredicted RBP15.18■□□□□ 0.02
CLCN4-201ENST00000380829 CARD9Q9H257 536 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 PPANQ9NQ55 473 aaKnown RBP15.18■□□□□ 0.02
CLCN4-201ENST00000380829 H3BRB1 525 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 DNM1LO00429 736 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 ASS1P00966 412 aaKnown RBP15.18■□□□□ 0.02
CLCN4-201ENST00000380829 CXCL8P10145 99 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 TBXAS1P24557 533 aaPredicted RBP15.18■□□□□ 0.02
CLCN4-201ENST00000380829 BPIFB4P59827 614 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 ACCSLQ4AC99 568 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 TLDC1Q6P9B6 456 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 PLEKHH3Q7Z736 793 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 TMEM130Q8N3G9 435 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 NPLOC4Q8TAT6 608 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 CDT1Q9H211 546 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 TUT1Q9H6E5 874 aaKnown RBP15.18■□□□□ 0.02
CLCN4-201ENST00000380829 AMACRQ9UHK6 382 aa15.18■□□□□ 0.02
CLCN4-201ENST00000380829 A0A1B0GUA9 196 aa15.17■□□□□ 0.02
CLCN4-201ENST00000380829 ASAP2O43150 1006 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms