RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 MLXIPLQ9NP71 852 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 IP6K2Q9UHH9 426 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 ARID2Q68CP9 1835 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 CFHP08603 1231 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 MAP2K2P36507 400 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 ZFYVE27Q5T4F4 411 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 GBP7Q8N8V2 638 aaPredicted RBP17.31■□□□□ 0.36
VPS16-203ENST00000380469 RBBP8NLQ8NC74 664 aaPredicted RBP17.31■□□□□ 0.36
VPS16-203ENST00000380469 FOXO6A8MYZ6 492 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 K7ERI5 159 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 RGS20O76081 388 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 CLTAP09496 248 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 SSTR3P32745 418 aaPredicted RBP17.31■□□□□ 0.36
VPS16-203ENST00000380469 MAGEA4P43358 317 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 WNT7BP56706 349 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 GSCP56915 257 aaPredicted RBP17.31■□□□□ 0.36
VPS16-203ENST00000380469 GNPTABQ3T906 1256 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 PREPLQ4J6C6 727 aaPredicted RBP17.31■□□□□ 0.36
VPS16-203ENST00000380469 CIAPIN1Q6FI81 312 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 PPP1R21Q6ZMI0 780 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 SPATA21Q7Z572 469 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 RCOR2Q8IZ40 523 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 CYP4X1Q8N118 509 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 ANKRD35Q8N283 1001 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 DEPTORQ8TB45 409 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 C9orf72Q96LT7 481 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 TGS1Q96RS0 853 aaKnown RBP17.31■□□□□ 0.36
VPS16-203ENST00000380469 NCAPGQ9BPX3 1015 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 APOBEC3GQ9HC16 384 aaKnown RBP17.31■□□□□ 0.36
VPS16-203ENST00000380469 ARL2BPQ9Y2Y0 163 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 TELO2Q9Y4R8 837 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 ACTL7BQ9Y614 415 aa17.31■□□□□ 0.36
VPS16-203ENST00000380469 KLRC2P26717 231 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 NFX1Q12986 1120 aaKnown RBP17.3■□□□□ 0.36
VPS16-203ENST00000380469 P3H1Q32P28 736 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 CRELD2Q6UXH1 353 aaPredicted RBP17.3■□□□□ 0.36
VPS16-203ENST00000380469 TBC1D1Q86TI0 1168 aaPredicted RBP17.3■□□□□ 0.36
VPS16-203ENST00000380469 FAM228AQ86W67 206 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 SRRM1Q8IYB3 904 aaKnown RBP17.3■□□□□ 0.36
VPS16-203ENST00000380469 PLCD3Q8N3E9 789 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 RIBC1Q8N443 379 aaPredicted RBP17.3■□□□□ 0.36
VPS16-203ENST00000380469 ZCCHC9Q8N567 271 aaKnown RBP17.3■□□□□ 0.36
VPS16-203ENST00000380469 TMEM143Q96AN5 459 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 FAM212AQ96EL1 285 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 RBM41Q96IZ5 413 aaKnown RBP17.3■□□□□ 0.36
VPS16-203ENST00000380469 MAGEB18Q96M61 343 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 CFAP57Q96MR6 1250 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 RBM15Q96T37 977 aaKnown RBP eCLIP17.3■□□□□ 0.36
VPS16-203ENST00000380469 TACO1Q9BSH4 297 aaKnown RBP17.3■□□□□ 0.36
VPS16-203ENST00000380469 MSTO1Q9BUK6 570 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 STK32BQ9NY57 414 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 PTPRJQ12913 1337 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 LRRIQ4A6NIV6 560 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 STAM2O75886 525 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 UBOX5O94941 541 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 ATP6V1G2O95670 118 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 SUPT20HL2P0C7V6 817 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 EZRP15311 586 aaKnown RBP17.3■□□□□ 0.36
VPS16-203ENST00000380469 MPP2Q14168 576 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 SUPT20HL1Q3ZLR7 823 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 WLSQ5T9L3 541 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 ZBTB45Q96K62 511 aaPredicted RBP17.3■□□□□ 0.36
VPS16-203ENST00000380469 CGRRF1Q99675 332 aa17.3■□□□□ 0.36
VPS16-203ENST00000380469 KIAA1217Q5T5P2 1943 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 SPATA31C2B4DYI2 1134 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 TJP3O95049 919 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 GH1P01241 217 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 ABHD2P08910 425 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 OAZ1P54368 228 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 BACE1P56817 501 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 NOP14P78316 857 aaKnown RBP17.29■□□□□ 0.36
VPS16-203ENST00000380469 TCP11Q8WWU5 503 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 ECT2Q9H8V3 914 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 ANKFY1Q9P2R3 1169 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 CNTN6Q9UQ52 1028 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 ZNF148Q9UQR1 794 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 ZNF541Q9H0D2 1346 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 PIGRP01833 764 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 CETPP11597 493 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 NAMPTP43490 491 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 NR1H3Q13133 447 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 KAZNQ674X7 775 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 CYP4F22Q6NT55 531 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 IMPG2Q9BZV3 1241 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 HAPLN2Q9GZV7 340 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 PORCNQ9H237 461 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 BAIAP2L1Q9UHR4 511 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 GGT7Q9UJ14 662 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 NUB1Q9Y5A7 615 aa17.29■□□□□ 0.36
VPS16-203ENST00000380469 RASA4BC9J798 803 aa17.28■□□□□ 0.36
VPS16-203ENST00000380469 RASA4O43374 803 aa17.28■□□□□ 0.36
VPS16-203ENST00000380469 LIASO43766 372 aa17.28■□□□□ 0.36
VPS16-203ENST00000380469 GJB6O95452 261 aa17.28■□□□□ 0.36
VPS16-203ENST00000380469 DPEP1P16444 411 aa17.28■□□□□ 0.36
VPS16-203ENST00000380469 GALNTL6Q49A17 601 aa17.28■□□□□ 0.36
VPS16-203ENST00000380469 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
VPS16-203ENST00000380469 RPAINQ86UA6 219 aa17.28■□□□□ 0.36
VPS16-203ENST00000380469 PNMA8AQ86V59 439 aaPredicted RBP17.28■□□□□ 0.36
VPS16-203ENST00000380469 ASAP3Q8TDY4 903 aa17.28■□□□□ 0.36
VPS16-203ENST00000380469 TTC25Q96NG3 672 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms