RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 ZNF214Q9UL59 606 aaPredicted RBP19.3■□□□□ 0.68
TDP2-202ENST00000378198 USP15Q9Y4E8 981 aaPredicted RBP19.3■□□□□ 0.68
TDP2-202ENST00000378198 O00370 1275 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 CDH16O75309 829 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 BRAFP15056 766 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 CREB1P16220 341 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 RDXP35241 583 aaKnown RBP19.29■□□□□ 0.68
TDP2-202ENST00000378198 VPS41P49754 854 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 RCOR2Q8IZ40 523 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 SCYL3Q8IZE3 742 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 CCHCR1Q8TD31 782 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 MGARPQ8TDB4 240 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 FAM212AQ96EL1 285 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 MSTO1Q9BUK6 570 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 HAPLN2Q9GZV7 340 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 CYP39A1Q9NYL5 469 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 CTNNAL1Q9UBT7 734 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 USTQ9Y2C2 406 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 LCTP09848 1927 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 TCP11X1B4DZS4 312 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 KLRC2P26717 231 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 SSR1P43307 286 aaKnown RBP19.29■□□□□ 0.68
TDP2-202ENST00000378198 DCAF15Q66K64 600 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 HIBCHQ6NVY1 386 aaPredicted RBP19.29■□□□□ 0.68
TDP2-202ENST00000378198 ZNF280CQ8ND82 737 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 MAGEC3Q8TD91 643 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 ASAP3Q8TDY4 903 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 JDP2Q8WYK2 163 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 TMEM143Q96AN5 459 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 DHX33Q9H6R0 707 aaKnown RBP19.29■□□□□ 0.68
TDP2-202ENST00000378198 ACAD9Q9H845 621 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 CD248Q9HCU0 757 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 MAFBQ9Y5Q3 323 aaPredicted RBP19.29■□□□□ 0.68
TDP2-202ENST00000378198 ACTL7BQ9Y614 415 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 ZNF541Q9H0D2 1346 aa19.29■□□□□ 0.68
TDP2-202ENST00000378198 ATP2A1O14983 1001 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 MGRN1O60291 552 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 SUN1O94901 812 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 EGFRP00533 1210 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 OATP04181 439 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 CD58P19256 250 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 GLRA2P23416 452 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 ARL2P36404 184 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 NOP14P78316 857 aaKnown RBP19.28■□□□□ 0.68
TDP2-202ENST00000378198 MKRN3Q13064 507 aaKnown RBP19.28■□□□□ 0.68
TDP2-202ENST00000378198 GSTA5Q7RTV2 222 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 RIBC1Q8N443 379 aaPredicted RBP19.28■□□□□ 0.68
TDP2-202ENST00000378198 ANKRD42Q8N9B4 389 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 ZKSCAN4Q969J2 545 aaPredicted RBP19.28■□□□□ 0.68
TDP2-202ENST00000378198 RBM41Q96IZ5 413 aaKnown RBP19.28■□□□□ 0.68
TDP2-202ENST00000378198 ZBTB45Q96K62 511 aaPredicted RBP19.28■□□□□ 0.68
TDP2-202ENST00000378198 C12orf42Q96LP6 360 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 ZNF302Q9NR11 478 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 A0A0B4J269 797 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 LRRIQ4A6NIV6 560 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 ATG7O95352 703 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 ABHD2P08910 425 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 ATP4AP20648 1035 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 NUGGCQ68CJ6 796 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 ARHGEF18Q6ZSZ5 1173 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 ZCCHC9Q8N567 271 aaKnown RBP19.28■□□□□ 0.68
TDP2-202ENST00000378198 PWWP2AQ96N64 755 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 PLCD4Q9BRC7 762 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 TMEM134Q9H6X4 195 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 YY1AP1Q9H869 796 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 FGFR1OP2Q9NVK5 253 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 NAALADL1Q9UQQ1 740 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 NUB1Q9Y5A7 615 aa19.28■□□□□ 0.68
TDP2-202ENST00000378198 LOC285556D6RIA3 1793 aa19.27■□□□□ 0.68
TDP2-202ENST00000378198 CNTNAP2Q9UHC6 1331 aa19.27■□□□□ 0.68
TDP2-202ENST00000378198 CFAP73A6NFT4 308 aa19.27■□□□□ 0.68
TDP2-202ENST00000378198 RPS12P25398 132 aaKnown RBP19.27■□□□□ 0.68
TDP2-202ENST00000378198 GJC1P36383 396 aa19.27■□□□□ 0.68
TDP2-202ENST00000378198 ELF3P78545 371 aaPredicted RBP19.27■□□□□ 0.68
TDP2-202ENST00000378198 SF3A3Q12874 501 aaKnown RBP eCLIP19.27■□□□□ 0.684e-14■■■■■ 33.6
TDP2-202ENST00000378198 NFX1Q12986 1120 aaKnown RBP19.27■□□□□ 0.68
TDP2-202ENST00000378198 TMEM132BQ14DG7 1078 aa19.27■□□□□ 0.68
TDP2-202ENST00000378198 DRICH1Q6PGQ1 229 aaPredicted RBP19.27■□□□□ 0.68
TDP2-202ENST00000378198 CCDC63Q8NA47 563 aa19.27■□□□□ 0.68
TDP2-202ENST00000378198 ZNF606Q8WXB4 792 aa19.27■□□□□ 0.68
TDP2-202ENST00000378198 CD2APQ9Y5K6 639 aa19.27■□□□□ 0.68
TDP2-202ENST00000378198 ADGRA2Q96PE1 1338 aa19.26■□□□□ 0.67
TDP2-202ENST00000378198 PTPRAP18433 802 aa19.26■□□□□ 0.67
TDP2-202ENST00000378198 MAGEA4P43358 317 aa19.26■□□□□ 0.67
TDP2-202ENST00000378198 P3H1Q32P28 736 aa19.26■□□□□ 0.67
TDP2-202ENST00000378198 NBPF12Q5TAG4 269 aaPredicted RBP19.26■□□□□ 0.67
TDP2-202ENST00000378198 CYP4X1Q8N118 509 aa19.26■□□□□ 0.67
TDP2-202ENST00000378198 GBP7Q8N8V2 638 aaPredicted RBP19.26■□□□□ 0.67
TDP2-202ENST00000378198 SLC7A3Q8WY07 619 aa19.26■□□□□ 0.67
TDP2-202ENST00000378198 FAM118BQ9BPY3 351 aa19.26■□□□□ 0.67
TDP2-202ENST00000378198 TARS2Q9BW92 718 aaKnown RBP19.26■□□□□ 0.67
TDP2-202ENST00000378198 TEX13BQ9BXU2 312 aa19.26■□□□□ 0.67
TDP2-202ENST00000378198 NIFKQ9BYG3 293 aaKnown RBP19.26■□□□□ 0.67
TDP2-202ENST00000378198 NKIRAS1Q9NYS0 192 aa19.26■□□□□ 0.67
TDP2-202ENST00000378198 ZNF112Q9UJU3 913 aa19.26■□□□□ 0.67
TDP2-202ENST00000378198 TPX2Q9ULW0 747 aaKnown RBP19.26■□□□□ 0.67
TDP2-202ENST00000378198 GSTTP1A0A1W2PQM5 241 aa19.26■□□□□ 0.67
TDP2-202ENST00000378198 C19orf81C9J6K1 198 aa19.26■□□□□ 0.67
TDP2-202ENST00000378198 LIASO43766 372 aa19.26■□□□□ 0.67
TDP2-202ENST00000378198 TJP3O95049 919 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms