RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 SASS6Q6UVJ0 657 aa14.27□□□□□ -0.12
CKAP2-202ENST00000378034 FRMD5Q7Z6J6 570 aa14.27□□□□□ -0.12
CKAP2-202ENST00000378034 LNX1Q8TBB1 728 aaPredicted RBP14.27□□□□□ -0.12
CKAP2-202ENST00000378034 ZNF516Q92618 1163 aa14.27□□□□□ -0.12
CKAP2-202ENST00000378034 KLHL5Q96PQ7 755 aa14.27□□□□□ -0.12
CKAP2-202ENST00000378034 OXCT2Q9BYC2 517 aaPredicted RBP14.27□□□□□ -0.12
CKAP2-202ENST00000378034 TMEM63CQ9P1W3 806 aa14.27□□□□□ -0.12
CKAP2-202ENST00000378034 SIX4Q9UIU6 781 aa14.27□□□□□ -0.12
CKAP2-202ENST00000378034 DSEQ9UL01 958 aa14.27□□□□□ -0.12
CKAP2-202ENST00000378034 BACE2Q9Y5Z0 518 aa14.27□□□□□ -0.12
CKAP2-202ENST00000378034 VWA8A3KMH1 1905 aa14.27□□□□□ -0.12
CKAP2-202ENST00000378034 KPNA7A9QM74 516 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 H7C4K7 107 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 I3L4J1 428 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 C2CD2LO14523 706 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 ADH1AP07327 375 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 KRT19P08727 400 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 CNPP09543 421 aaKnown RBP14.27□□□□□ -0.13
CKAP2-202ENST00000378034 SRGAP2BP0DMP2 458 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 ODC1P11926 461 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 TYMPP19971 482 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 TKTP29401 623 aaKnown RBP14.27□□□□□ -0.13
CKAP2-202ENST00000378034 SCN1AP35498 2009 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 STX17P56962 302 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 PSMD5Q16401 504 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 DPCR1Q3MIW9 517 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 TMEM130Q8N3G9 435 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 PPM1EQ8WY54 764 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 PABPC5Q96DU9 382 aaKnown RBP14.27□□□□□ -0.13
CKAP2-202ENST00000378034 B3GALT6Q96L58 329 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 SENP8Q96LD8 212 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 GDAP2Q9NXN4 497 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 ARMCX3Q9UH62 379 aaPredicted RBP14.27□□□□□ -0.13
CKAP2-202ENST00000378034 COG5Q9UP83 839 aa14.27□□□□□ -0.13
CKAP2-202ENST00000378034 SPTLC1O15269 473 aa14.26□□□□□ -0.13
CKAP2-202ENST00000378034 CLASP2O75122 1294 aaKnown RBP14.26□□□□□ -0.13
CKAP2-202ENST00000378034 PHACTR2O75167 634 aa14.26□□□□□ -0.13
CKAP2-202ENST00000378034 LETM1O95202 739 aaPredicted RBP14.26□□□□□ -0.13
CKAP2-202ENST00000378034 STAU1O95793 577 aaKnown RBP14.26□□□□□ -0.13
CKAP2-202ENST00000378034 C4BPAP04003 597 aaKnown RBP14.26□□□□□ -0.13
CKAP2-202ENST00000378034 ATICP31939 592 aa14.26□□□□□ -0.13
CKAP2-202ENST00000378034 NDUFV1P49821 464 aa14.26□□□□□ -0.13
CKAP2-202ENST00000378034 DLG4P78352 724 aa14.26□□□□□ -0.13
CKAP2-202ENST00000378034 ADAM15Q13444 863 aa14.26□□□□□ -0.13
CKAP2-202ENST00000378034 TRPC3Q13507 836 aa14.26□□□□□ -0.13
CKAP2-202ENST00000378034 MRPL58Q14197 206 aaKnown RBP14.26□□□□□ -0.13
CKAP2-202ENST00000378034 CTC1Q2NKJ3 1217 aa14.26□□□□□ -0.13
CKAP2-202ENST00000378034 TMEM184AQ6ZMB5 413 aa14.26□□□□□ -0.13
CKAP2-202ENST00000378034 RBM23Q86U06 439 aaKnown RBP14.26□□□□□ -0.13
CKAP2-202ENST00000378034 ANO10Q9NW15 660 aa14.26□□□□□ -0.13
CKAP2-202ENST00000378034 MTRRQ9UBK8 725 aa14.26□□□□□ -0.13
CKAP2-202ENST00000378034 PER2O15055 1255 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 TEX28O15482 410 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 OAZ2O95190 189 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 CYP11A1P05108 521 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 KLRC2P26717 231 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 BIRC3Q13489 604 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 KCNC3Q14003 757 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 SKIV2LQ15477 1246 aaKnown RBP14.25□□□□□ -0.13
CKAP2-202ENST00000378034 ZACNQ401N2 412 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 VARS2Q5ST30 1063 aaKnown RBP14.25□□□□□ -0.13
CKAP2-202ENST00000378034 C1orf220Q5T0J3 134 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 CAVIN1Q6NZI2 390 aaKnown RBP14.25□□□□□ -0.13
CKAP2-202ENST00000378034 PRSS55Q6UWB4 352 aaPredicted RBP14.25□□□□□ -0.13
CKAP2-202ENST00000378034 C15orf39Q6ZRI6 1047 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 SPATA18Q8TC71 538 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 EEF2KMTQ96G04 330 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 HPDLQ96IR7 371 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 SRRTQ9BXP5 876 aaKnown RBP14.25□□□□□ -0.13
CKAP2-202ENST00000378034 IGFLR1Q9H665 355 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 MYO7AQ13402 2215 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.25□□□□□ -0.13
CKAP2-202ENST00000378034 CYB561D2O14569 222 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 MARSP56192 900 aaKnown RBP14.25□□□□□ -0.13
CKAP2-202ENST00000378034 YWHAHQ04917 246 aaPredicted RBP14.25□□□□□ -0.13
CKAP2-202ENST00000378034 STX1AQ16623 288 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 CCDC40Q4G0X9 1142 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 TDRD10Q5VZ19 366 aaKnown RBP14.25□□□□□ -0.13
CKAP2-202ENST00000378034 ZNF280DQ6N043 979 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 SV2AQ7L0J3 742 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 DPH6Q7L8W6 267 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 METTL23Q86XA0 190 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 HLA-CQ95604 372 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 FAM84AQ96KN4 292 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 VRTNQ9H8Y1 702 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 TMEM8AQ9HCN3 771 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 DPP7Q9UHL4 492 aa14.25□□□□□ -0.13
CKAP2-202ENST00000378034 TBC1D4O60343 1298 aa14.24□□□□□ -0.13
CKAP2-202ENST00000378034 CST3P01034 146 aaPredicted RBP14.24□□□□□ -0.13
CKAP2-202ENST00000378034 GTF2F1P35269 517 aaKnown RBP eCLIP14.24□□□□□ -0.13
CKAP2-202ENST00000378034 CLCN4P51793 760 aa14.24□□□□□ -0.13
CKAP2-202ENST00000378034 ELMSAN1Q6PJG2 1045 aa14.24□□□□□ -0.13
CKAP2-202ENST00000378034 TMEM86AQ8N2M4 240 aa14.24□□□□□ -0.13
CKAP2-202ENST00000378034 SLC22A17Q8WUG5 538 aa14.24□□□□□ -0.13
CKAP2-202ENST00000378034 HDAC7Q8WUI4 952 aa14.24□□□□□ -0.13
CKAP2-202ENST00000378034 TAF4BQ92750 862 aa14.24□□□□□ -0.13
CKAP2-202ENST00000378034 CASP10Q92851 521 aa14.24□□□□□ -0.13
CKAP2-202ENST00000378034 CLSTN3Q9BQT9 956 aa14.24□□□□□ -0.13
CKAP2-202ENST00000378034 HUS1O60921 280 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 FAM163BP0C2L3 166 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms