RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 SLITRK1Q96PX8 696 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 GNGT2O14610 69 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 ITIH2P19823 946 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 FSCBQ5H9T9 825 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 FAM117BQ6P1L5 589 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 ACAD11Q709F0 780 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 ZNF720Q7Z2F6 126 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 CBWD2Q8IUF1 395 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 ELAC2Q9BQ52 826 aaKnown RBP18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 OSBPL8Q9BZF1 889 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 AAASQ9NRG9 546 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 FBXL5Q9UKA1 691 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 GTF3C4Q9UKN8 822 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 TYK2P29597 1187 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 POU5F1BQ06416 359 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 TRIM65Q6PJ69 517 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 ARHGAP18Q8N392 663 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 KRT35Q92764 455 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 ULK4Q96C45 1275 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 FGD4Q96M96 766 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 SARS2Q9NP81 518 aaKnown RBP18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 ZFATQ9P243 1243 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 PCDHB8Q9UN66 801 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 COMTP21964 271 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 KLK7P49862 253 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 PPP2R2AP63151 447 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 HP1BP3Q5SSJ5 553 aaPredicted RBP18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 PLAGL2Q9UPG8 496 aa18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 A0A0G2JND7 137 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 DCDC2CA8MYV0 355 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 HOXA2O43364 376 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 ATP9BO43861 1147 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 BFSP2Q13515 415 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 ANKRD20A4Q4UJ75 823 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 ANKRD20A8PQ5CZ79 823 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 ANKRD20A2Q5SQ80 823 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 ANKRD20A1Q5TYW2 823 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 TAS2R42Q7RTR8 314 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 PPHLN1Q8NEY8 458 aaKnown RBP18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 UBA3Q8TBC4 463 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 TRIM54Q9BYV2 358 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 CATSPERBQ9H7T0 1116 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 SENP1Q9P0U3 644 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 BRD2P25440 801 aaKnown RBP18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 ATP8B4Q8TF62 1192 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 ALG6Q9Y672 507 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 LAMB3Q13751 1172 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 DCAF6Q58WW2 860 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 MTHFD1LQ6UB35 978 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 SLC7A14Q8TBB6 771 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 CYTH2Q99418 400 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 LRRC1Q9BTT6 524 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 DRC3Q9H069 523 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 KCNQ5Q9NR82 932 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 OLFML3Q9NRN5 406 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 PRG3Q9Y2Y8 225 aaPredicted RBP18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 H3BRB1 525 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 GRAP2O75791 330 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 ALDH7A1P49419 539 aaKnown RBP18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 PDCLQ13371 301 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 PDK1Q15118 436 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 CGRRF1Q99675 332 aa18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 TUT1Q9H6E5 874 aaKnown RBP18.79■□□□□ 0.6
CLSTN1-202ENST00000377298 UBA6A0AVT1 1052 aaPredicted RBP18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 MAPTP10636 758 aaKnown RBP18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 ST8SIA6P61647 398 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 KIF19Q2TAC6 998 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 TTI2Q6NXR4 508 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 FOXP3Q9BZS1 431 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 ZCCHC17Q9NP64 241 aaKnown RBP18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 GTSE1Q9NYZ3 720 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 PPARGC1AQ9UBK2 798 aaKnown RBP18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 SMAPO00193 183 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 PON1P27169 355 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 ALDH1A3P47895 512 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 ACAD10Q6JQN1 1059 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 CCNYL1Q8N7R7 359 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 HACD3Q9P035 362 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 KIF3CO14782 793 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 HMBSP08397 361 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 KIZQ2M2Z5 673 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 CENPPQ6IPU0 288 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 COG1Q8WTW3 980 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 CBWD1Q9BRT8 395 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 SESN2P58004 480 aaPredicted RBP18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 BOLA3Q53S33 107 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 FBXO41Q8TF61 875 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 ZC3H15Q8WU90 426 aaKnown RBP18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 ANKRD7Q92527 254 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 GBP5Q96PP8 586 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 KLK14Q9P0G3 267 aa18.78■□□□□ 0.6
CLSTN1-202ENST00000377298 MAP3K7O43318 606 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 BYSLQ13895 437 aaKnown RBP18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 PDZD8Q8NEN9 1154 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 N4BP2L2Q92802 583 aaPredicted RBP18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 GLIS2Q9BZE0 524 aaPredicted RBP18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 VTA1Q9NP79 307 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 RAB6BQ9NRW1 208 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 NAGPAQ9UK23 515 aa18.77■□□□□ 0.6
CLSTN1-202ENST00000377298 CFLARO15519 480 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms