RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 C12orf56Q8IXR9 622 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 FUKQ8N0W3 1084 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 EMC1Q8N766 993 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 CCDC89Q8N998 374 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 AGBL3Q8NEM8 1001 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 MORC4Q8TE76 937 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 PSPC1Q8WXF1 523 aaKnown RBP13.7□□□□□ -0.22
USP11-204ENST00000377107 MFSD14AQ96MC6 490 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 TRAIPQ9BWF2 469 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 ADAM7Q9H2U9 754 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 TRIM33Q9UPN9 1127 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 FSCN2O14926 492 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 RAP1GAPP47736 663 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 HIRAP54198 1017 aaPredicted RBP13.7□□□□□ -0.22
USP11-204ENST00000377107 DRG2P55039 364 aaKnown RBP13.7□□□□□ -0.22
USP11-204ENST00000377107 LACTBP83111 547 aaPredicted RBP13.7□□□□□ -0.22
USP11-204ENST00000377107 DNAJC3Q13217 504 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 SIX1Q15475 284 aaPredicted RBP13.7□□□□□ -0.22
USP11-204ENST00000377107 XKR3Q5GH77 459 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 TAS1R3Q7RTX0 852 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 SLC17A8Q8NDX2 589 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 TRAPPC12Q8WVT3 735 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 KLHL29Q96CT2 875 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 CALN1Q9BXU9 219 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 ZNF541Q9H0D2 1346 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 LY75O60449 1722 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 SUN1O94901 812 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 TMEM191BP0C7N4 346 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 MAP2K2P36507 400 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 FASTKD3Q14CZ7 662 aaKnown RBP13.7□□□□□ -0.22
USP11-204ENST00000377107 SMAD1Q15797 465 aaKnown RBP13.7□□□□□ -0.22
USP11-204ENST00000377107 TXNRD3NBQ6F5E7 133 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 C6orf89Q6UWU4 347 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 TRMT10CQ7L0Y3 403 aaKnown RBP13.7□□□□□ -0.22
USP11-204ENST00000377107 NIPA1Q7RTP0 329 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 VSIG1Q86XK7 387 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 RNF149Q8NC42 400 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 MAIP1Q8WWC4 291 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 ATXN2LQ8WWM7 1075 aaKnown RBP13.7□□□□□ -0.22
USP11-204ENST00000377107 TXLNGYQ9BZA5 131 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 LRRC19Q9H756 370 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 ACAD9Q9H845 621 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 PIM2Q9P1W9 311 aa13.7□□□□□ -0.22
USP11-204ENST00000377107 ANKRD31Q8N7Z5 1873 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 NOP56O00567 594 aaKnown RBP13.69□□□□□ -0.22
USP11-204ENST00000377107 TBC1D12O60347 775 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 GRIN3BO60391 1043 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 RGS20O76081 388 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 CA4P22748 312 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 GLRA2P23416 452 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 MAGEA4P43358 317 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 NFX1Q12986 1120 aaKnown RBP13.69□□□□□ -0.22
USP11-204ENST00000377107 MAMLD1Q13495 774 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 GPAT2Q6NUI2 795 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 ARMC9Q7Z3E5 817 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 RHPN2Q8IUC4 686 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 ZNF606Q8WXB4 792 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 SPOCK2Q92563 424 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 HSPH1Q92598 858 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 AAASQ9NRG9 546 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 PNMA3Q9UL41 463 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 NEU2Q9Y3R4 380 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 MYPNQ86TC9 1320 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 KCNA2P16389 499 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 ATP5DP30049 168 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 PDIA2Q13087 525 aaKnown RBP13.69□□□□□ -0.22
USP11-204ENST00000377107 STXBP2Q15833 593 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 CDO1Q16878 200 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 ZNF449Q6P9G9 518 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 GADL1Q6ZQY3 521 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 ANKS1BQ7Z6G8 1248 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 ERICH1Q86X53 443 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 LRRN4Q8WUT4 740 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 TEX13BQ9BXU2 312 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 PITPNM3Q9BZ71 974 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 ECT2Q9H8V3 914 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 TPX2Q9ULW0 747 aaKnown RBP13.69□□□□□ -0.22
USP11-204ENST00000377107 SYNPO2Q9UMS6 1093 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 CETPP11597 493 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 GBP2P32456 591 aaPredicted RBP13.69□□□□□ -0.22
USP11-204ENST00000377107 CDH8P55286 799 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 GCNT1Q02742 428 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 TTLL12Q14166 644 aaPredicted RBP13.69□□□□□ -0.22
USP11-204ENST00000377107 BBS9Q3SYG4 887 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 ZACNQ401N2 412 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 ABRAQ8N0Z2 381 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 FEZF2Q8TBJ5 459 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 PRPF31Q8WWY3 499 aaKnown RBP13.69□□□□□ -0.22
USP11-204ENST00000377107 DDX27Q96GQ7 796 aaKnown RBP13.69□□□□□ -0.22
USP11-204ENST00000377107 L3MBTL1Q9Y468 752 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 CEP83Q9Y592 693 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 ZNF831Q5JPB2 1677 aa13.69□□□□□ -0.22
USP11-204ENST00000377107 CHUKO15111 745 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 GRAP2O75791 330 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 LYPLA2O95372 231 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 UNGP13051 313 aaPredicted RBP13.68□□□□□ -0.22
USP11-204ENST00000377107 NRLP54845 237 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 MPP2Q14168 576 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 CROCCP2Q86T23 111 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 CEP120Q8N960 986 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms