RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 RBAKQ9NYW8 714 aaPredicted RBP26.85■■□□□ 1.89
C9orf40-201ENST00000376854 LGALS13Q9UHV8 139 aa26.85■■□□□ 1.89
C9orf40-201ENST00000376854 STYXL1Q9Y6J8 313 aa26.85■■□□□ 1.89
C9orf40-201ENST00000376854 SCINQ9Y6U3 715 aa26.85■■□□□ 1.89
C9orf40-201ENST00000376854 TLR3O15455 904 aaKnown RBP26.84■■□□□ 1.89
C9orf40-201ENST00000376854 GH1P01241 217 aa26.84■■□□□ 1.89
C9orf40-201ENST00000376854 EMC2Q15006 297 aa26.84■■□□□ 1.89
C9orf40-201ENST00000376854 DALRD3Q5D0E6 543 aaKnown RBP26.84■■□□□ 1.89
C9orf40-201ENST00000376854 PLEKHA7Q6IQ23 1121 aa26.84■■□□□ 1.89
C9orf40-201ENST00000376854 CRELD2Q6UXH1 353 aaPredicted RBP26.84■■□□□ 1.89
C9orf40-201ENST00000376854 ABHD15Q6UXT9 468 aa26.84■■□□□ 1.89
C9orf40-201ENST00000376854 PHF13Q86YI8 300 aaPredicted RBP26.84■■□□□ 1.89
C9orf40-201ENST00000376854 C9orf72Q96LT7 481 aa26.84■■□□□ 1.89
C9orf40-201ENST00000376854 NAALADL1Q9UQQ1 740 aa26.84■■□□□ 1.89
C9orf40-201ENST00000376854 NFASCO94856 1347 aa26.84■■□□□ 1.89
C9orf40-201ENST00000376854 CDH16O75309 829 aa26.84■■□□□ 1.89
C9orf40-201ENST00000376854 SUN1O94901 812 aa26.84■■□□□ 1.89
C9orf40-201ENST00000376854 POLGP54098 1239 aaPredicted RBP26.84■■□□□ 1.89
C9orf40-201ENST00000376854 PRUNE1Q86TP1 453 aa26.84■■□□□ 1.89
C9orf40-201ENST00000376854 TMEM143Q96AN5 459 aa26.84■■□□□ 1.89
C9orf40-201ENST00000376854 CCDC77Q9BR77 488 aa26.84■■□□□ 1.89
C9orf40-201ENST00000376854 HAPLN2Q9GZV7 340 aa26.84■■□□□ 1.89
C9orf40-201ENST00000376854 GGT7Q9UJ14 662 aa26.84■■□□□ 1.89
C9orf40-201ENST00000376854 XKR3Q5GH77 459 aa26.83■■□□□ 1.89
C9orf40-201ENST00000376854 RELL1Q8IUW5 271 aa26.83■■□□□ 1.89
C9orf40-201ENST00000376854 RBBP8NLQ8NC74 664 aaPredicted RBP26.83■■□□□ 1.89
C9orf40-201ENST00000376854 MAGEC3Q8TD91 643 aa26.83■■□□□ 1.89
C9orf40-201ENST00000376854 ZBTB45Q96K62 511 aaPredicted RBP26.83■■□□□ 1.89
C9orf40-201ENST00000376854 GJA3Q9Y6H8 435 aa26.83■■□□□ 1.89
C9orf40-201ENST00000376854 ZNF541Q9H0D2 1346 aa26.83■■□□□ 1.89
C9orf40-201ENST00000376854 GSTTP1A0A1W2PQM5 241 aa26.83■■□□□ 1.89
C9orf40-201ENST00000376854 UBOX5O94941 541 aa26.83■■□□□ 1.89
C9orf40-201ENST00000376854 GJB6O95452 261 aa26.83■■□□□ 1.89
C9orf40-201ENST00000376854 KLRC2P26717 231 aa26.83■■□□□ 1.89
C9orf40-201ENST00000376854 BACE1P56817 501 aa26.83■■□□□ 1.89
C9orf40-201ENST00000376854 PREPLQ4J6C6 727 aaPredicted RBP26.83■■□□□ 1.89
C9orf40-201ENST00000376854 MIS18BP1Q6P0N0 1132 aa26.83■■□□□ 1.89
C9orf40-201ENST00000376854 SRRM1Q8IYB3 904 aaKnown RBP26.83■■□□□ 1.89
C9orf40-201ENST00000376854 FAM212AQ96EL1 285 aa26.83■■□□□ 1.89
C9orf40-201ENST00000376854 KCNG1Q9UIX4 513 aa26.83■■□□□ 1.89
C9orf40-201ENST00000376854 AGAP1Q9UPQ3 857 aa26.83■■□□□ 1.89
C9orf40-201ENST00000376854 ARID2Q68CP9 1835 aa26.82■■□□□ 1.88
C9orf40-201ENST00000376854 ZBTB7AO95365 584 aa26.82■■□□□ 1.88
C9orf40-201ENST00000376854 STX2P32856 288 aa26.82■■□□□ 1.88
C9orf40-201ENST00000376854 STAT4Q14765 748 aa26.82■■□□□ 1.88
C9orf40-201ENST00000376854 CEP57Q86XR8 500 aa26.82■■□□□ 1.88
C9orf40-201ENST00000376854 CDHR1Q96JP9 859 aa26.82■■□□□ 1.88
C9orf40-201ENST00000376854 NCAPGQ9BPX3 1015 aa26.82■■□□□ 1.88
C9orf40-201ENST00000376854 CLTAP09496 248 aa26.82■■□□□ 1.88
C9orf40-201ENST00000376854 GSCP56915 257 aaPredicted RBP26.82■■□□□ 1.88
C9orf40-201ENST00000376854 C1QBPQ07021 282 aaKnown RBP26.82■■□□□ 1.88
C9orf40-201ENST00000376854 P3H1Q32P28 736 aa26.82■■□□□ 1.88
C9orf40-201ENST00000376854 ZBTB41Q5SVQ8 909 aa26.82■■□□□ 1.88
C9orf40-201ENST00000376854 REPS2Q8NFH8 660 aa26.82■■□□□ 1.88
C9orf40-201ENST00000376854 FEZF2Q8TBJ5 459 aa26.82■■□□□ 1.88
C9orf40-201ENST00000376854 PARVAQ9NVD7 372 aa26.82■■□□□ 1.88
C9orf40-201ENST00000376854 KLHL11Q9NVR0 708 aa26.82■■□□□ 1.88
C9orf40-201ENST00000376854 CFAP73A6NFT4 308 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 HMGCS2P54868 508 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 NFX1Q12986 1120 aaKnown RBP26.81■■□□□ 1.88
C9orf40-201ENST00000376854 ARHGEF18Q6ZSZ5 1173 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 SEPT14Q6ZU15 432 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 SPATA21Q7Z572 469 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 TBC1D1Q86TI0 1168 aaPredicted RBP26.81■■□□□ 1.88
C9orf40-201ENST00000376854 TGS1Q96RS0 853 aaKnown RBP26.81■■□□□ 1.88
C9orf40-201ENST00000376854 RBM15Q96T37 977 aaKnown RBP eCLIP26.81■■□□□ 1.883e-10■■■■■ 44.7
C9orf40-201ENST00000376854 NKIRAS1Q9NYS0 192 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 NUB1Q9Y5A7 615 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 SRCAPQ6ZRS2 3230 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 PARP14Q460N5 1801 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 LRRIQ4A6NIV6 560 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 ATP6V1G2O95670 118 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 TBXAS1P24557 533 aaPredicted RBP26.81■■□□□ 1.88
C9orf40-201ENST00000376854 MAP2K2P36507 400 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 CETN2P41208 172 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 ZKSCAN8Q15776 578 aaPredicted RBP26.81■■□□□ 1.88
C9orf40-201ENST00000376854 SLFN12LQ6IEE8 588 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 ZCCHC9Q8N567 271 aaKnown RBP26.81■■□□□ 1.88
C9orf40-201ENST00000376854 DEPTORQ8TB45 409 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 ASAP3Q8TDY4 903 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 MSTO1Q9BUK6 570 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 ANKFY1Q9P2R3 1169 aa26.81■■□□□ 1.88
C9orf40-201ENST00000376854 SUPT20HL2P0C7V6 817 aa26.8■■□□□ 1.88
C9orf40-201ENST00000376854 MAGEA4P43358 317 aa26.8■■□□□ 1.88
C9orf40-201ENST00000376854 NOP14P78316 857 aaKnown RBP26.8■■□□□ 1.88
C9orf40-201ENST00000376854 LMNB2Q03252 620 aa26.8■■□□□ 1.88
C9orf40-201ENST00000376854 ADCY1Q08828 1119 aa26.8■■□□□ 1.88
C9orf40-201ENST00000376854 SUPT20HL1Q3ZLR7 823 aa26.8■■□□□ 1.88
C9orf40-201ENST00000376854 WLSQ5T9L3 541 aa26.8■■□□□ 1.88
C9orf40-201ENST00000376854 KAZNQ674X7 775 aa26.8■■□□□ 1.88
C9orf40-201ENST00000376854 CYP4F22Q6NT55 531 aa26.8■■□□□ 1.88
C9orf40-201ENST00000376854 TCP11Q8WWU5 503 aa26.8■■□□□ 1.88
C9orf40-201ENST00000376854 CGRRF1Q99675 332 aa26.8■■□□□ 1.88
C9orf40-201ENST00000376854 IP6K2Q9UHH9 426 aa26.8■■□□□ 1.88
C9orf40-201ENST00000376854 CNTN6Q9UQ52 1028 aa26.8■■□□□ 1.88
C9orf40-201ENST00000376854 ARL2BPQ9Y2Y0 163 aa26.8■■□□□ 1.88
C9orf40-201ENST00000376854 COL11A1P12107 1806 aaPredicted RBP26.8■■□□□ 1.88
C9orf40-201ENST00000376854 PI4K2BG5E9Z4 385 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 K7ERI5 159 aa26.79■■□□□ 1.88
C9orf40-201ENST00000376854 ATP13A4Q4VNC1 1196 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms