RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CCDC39Q9UFE4 941 aa22.85■■□□□ 1.25
VSX1-201ENST00000376707 CPSF3Q9UKF6 684 aaKnown RBP22.85■■□□□ 1.25
VSX1-201ENST00000376707 KANSL1LA0AUZ9 987 aa22.84■■□□□ 1.25
VSX1-201ENST00000376707 ADRB2P07550 413 aa22.84■■□□□ 1.25
VSX1-201ENST00000376707 ZC2HC1CQ53FD0 456 aaPredicted RBP22.84■■□□□ 1.25
VSX1-201ENST00000376707 SPATA1Q5VX52 437 aa22.84■■□□□ 1.25
VSX1-201ENST00000376707 JADE1Q6IE81 842 aa22.84■■□□□ 1.25
VSX1-201ENST00000376707 USP49Q70CQ1 688 aa22.84■■□□□ 1.25
VSX1-201ENST00000376707 FBXO2Q9UK22 296 aaPredicted RBP22.84■■□□□ 1.25
VSX1-201ENST00000376707 MORC2Q9Y6X9 1032 aaPredicted RBP22.84■■□□□ 1.25
VSX1-201ENST00000376707 PDCD11Q14690 1871 aaKnown RBP22.83■■□□□ 1.25
VSX1-201ENST00000376707 MYH15Q9Y2K3 1946 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 NOTCH4Q99466 2003 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 OR6C75A6NL08 312 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 MICAL2O94851 1124 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 TXLNAP40222 546 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 ADALQ6DHV7 355 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 TANGO2Q6ICL3 276 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 DYMQ7RTS9 669 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 LEMD2Q8NC56 503 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 ELSPBP1Q96BH3 223 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 PGLYRP2Q96PD5 576 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 PLA2G2FQ9BZM2 168 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 ASAH2Q9NR71 780 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 CEP72Q9P209 647 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 STK17AQ9UEE5 414 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 MTMR6Q9Y217 621 aa22.83■■□□□ 1.25
VSX1-201ENST00000376707 SRPRBQ9Y5M8 271 aaKnown RBP22.83■■□□□ 1.25
VSX1-201ENST00000376707 ANKRD63C9JTQ0 380 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 PPEF2O14830 753 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 LRRN2O75325 713 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 OR4Q2P0C623 313 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 MYL4P12829 197 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 CCR2P41597 374 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 ACOT2P49753 483 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 TMEM132DQ14C87 1099 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 UBXN2BQ14CS0 331 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 OVOS1Q6IE37 1185 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 SLFN12LQ6IEE8 588 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 POTEHQ6S545 545 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 C1orf210Q8IVY1 113 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 HS6ST3Q8IZP7 471 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 DDX23Q9BUQ8 820 aaKnown RBP22.82■■□□□ 1.24
VSX1-201ENST00000376707 ST6GALNAC4Q9H4F1 302 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 ZFP14Q9HCL3 533 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 DERAQ9Y315 318 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 YIPF1Q9Y548 306 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 MYO15AQ9UKN7 3530 aa22.82■■□□□ 1.24
VSX1-201ENST00000376707 TISP43B9A030 160 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 NFICP08651 508 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 ODC1P11926 461 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 GLULP15104 373 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 TYMPP19971 482 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 PAX3P23760 479 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 LILRA4P59901 499 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 CEBPZQ03701 1054 aaKnown RBP22.81■■□□□ 1.24
VSX1-201ENST00000376707 PLD1Q13393 1074 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 FAM78AQ5JUQ0 283 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 RRAGBQ5VZM2 374 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 C9orf57Q5W0N0 161 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 FAM173BQ6P4H8 233 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 SFR1Q86XK3 245 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 SNX21Q969T3 373 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 SENP8Q96LD8 212 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 BCO2Q9BYV7 579 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 ZSCAN16Q9H4T2 348 aaPredicted RBP22.81■■□□□ 1.24
VSX1-201ENST00000376707 ASB7Q9H672 318 aa22.81■■□□□ 1.24
VSX1-201ENST00000376707 AGO2Q9UKV8 859 aaKnown RBP22.81■■□□□ 1.24
VSX1-201ENST00000376707 FAM170BA6NMN3 283 aa22.8■■□□□ 1.24
VSX1-201ENST00000376707 FCARP24071 287 aa22.8■■□□□ 1.24
VSX1-201ENST00000376707 DUSP4Q13115 394 aa22.8■■□□□ 1.24
VSX1-201ENST00000376707 GPR17Q13304 367 aa22.8■■□□□ 1.24
VSX1-201ENST00000376707 ARMCX5Q6P1M9 558 aa22.8■■□□□ 1.24
VSX1-201ENST00000376707 TPRG1Q6ZUI0 275 aa22.8■■□□□ 1.24
VSX1-201ENST00000376707 ZNF720Q7Z2F6 126 aa22.8■■□□□ 1.24
VSX1-201ENST00000376707 HVCN1Q96D96 273 aa22.8■■□□□ 1.24
VSX1-201ENST00000376707 CLIC6Q96NY7 704 aa22.8■■□□□ 1.24
VSX1-201ENST00000376707 OSBPL6Q9BZF3 934 aa22.8■■□□□ 1.24
VSX1-201ENST00000376707 SEL1LQ9UBV2 794 aa22.8■■□□□ 1.24
VSX1-201ENST00000376707 STX6O43752 255 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 CD72P21854 359 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 EPHB3P54753 998 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 EPHA5P54756 1037 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 MYBPC2Q14324 1141 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 GRM2Q14416 872 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 SV2BQ7L1I2 683 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 ADSSL1Q8N142 457 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 KCNG4Q8TDN1 519 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 POMGNT1Q8WZA1 660 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 SMARCD2Q92925 531 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 ASB16Q96NS5 453 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 BRD9Q9H8M2 597 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 MRPL44Q9H9J2 332 aaKnown RBP22.79■■□□□ 1.24
VSX1-201ENST00000376707 LTB4R2Q9NPC1 389 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 C2CD2Q9Y426 696 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 MTF2Q9Y483 593 aaPredicted RBP22.79■■□□□ 1.24
VSX1-201ENST00000376707 STYXL1Q9Y6J8 313 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 R4GN57 208 aa22.79■■□□□ 1.24
VSX1-201ENST00000376707 PIRO00625 290 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 NRG2O14511 850 aaPredicted RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms