RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 PRRT2Q7Z6L0 340 aaPredicted RBP10.22□□□□□ -0.77
TRIM39-202ENST00000376659 ANKLE1Q8NAG6 615 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 GLIS1Q8NBF1 620 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 MDM1Q8TC05 714 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 TRIM31Q9BZY9 425 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 FBXO40Q9UH90 709 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 PCDHGC3Q9UN70 934 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 TMEM110-MUSTN1A8MSY1 372 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 H0YCG3 227 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 DNM1LO00429 736 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 AGTP01019 485 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 IQCF3P0C7M6 154 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 MPP2Q14168 576 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 PLCB4Q15147 1175 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 OASLQ15646 514 aaKnown RBP10.22□□□□□ -0.77
TRIM39-202ENST00000376659 CNGA2Q16280 664 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 SEL1L2Q5TEA6 688 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 ZPBP2Q6X784 338 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 EXOC3L1Q86VI1 746 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 ACO2Q99798 780 aaKnown RBP10.22□□□□□ -0.77
TRIM39-202ENST00000376659 SEPT11Q9NVA2 429 aaKnown RBP10.22□□□□□ -0.77
TRIM39-202ENST00000376659 PPME1Q9Y570 386 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 CEP83Q9Y592 693 aa10.22□□□□□ -0.77
TRIM39-202ENST00000376659 SLC25A11Q02978 314 aaKnown RBP10.21□□□□□ -0.77
TRIM39-202ENST00000376659 TXNRD3NBQ6F5E7 133 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 CCDC62Q6P9F0 684 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 TRMT10CQ7L0Y3 403 aaKnown RBP10.21□□□□□ -0.77
TRIM39-202ENST00000376659 TMEM130Q8N3G9 435 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 SLITRK1Q96PX8 696 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 XPO6Q96QU8 1125 aaKnown RBP10.21□□□□□ -0.77
TRIM39-202ENST00000376659 BCO2Q9BYV7 579 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 AZI2Q9H6S1 392 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 CNOT10Q9H9A5 744 aaKnown RBP10.21□□□□□ -0.77
TRIM39-202ENST00000376659 RBAKQ9NYW8 714 aaPredicted RBP10.21□□□□□ -0.77
TRIM39-202ENST00000376659 SLC12A4Q9UP95 1085 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 DKC1O60832 514 aaKnown RBP eCLIP10.21□□□□□ -0.77
TRIM39-202ENST00000376659 GJB6O95452 261 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 ACTN3Q08043 901 aaPredicted RBP10.21□□□□□ -0.77
TRIM39-202ENST00000376659 AMHR2Q16671 573 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 MTERF2Q49AM1 385 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 DLK2Q6UY11 383 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 TRIM72Q6ZMU5 477 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 WDR49Q8IV35 697 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 C1orf54Q8WWF1 131 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 TRIM11Q96F44 468 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 GPR20Q99678 358 aa10.21□□□□□ -0.77
TRIM39-202ENST00000376659 NDUFAB1O14561 156 aa10.21□□□□□ -0.78
TRIM39-202ENST00000376659 CHN1P15882 459 aa10.21□□□□□ -0.78
TRIM39-202ENST00000376659 NOP14P78316 857 aaKnown RBP10.21□□□□□ -0.78
TRIM39-202ENST00000376659 WDR72Q3MJ13 1102 aa10.21□□□□□ -0.78
TRIM39-202ENST00000376659 RBBP8NLQ8NC74 664 aaPredicted RBP10.21□□□□□ -0.78
TRIM39-202ENST00000376659 EXD1Q8NHP7 514 aa10.21□□□□□ -0.78
TRIM39-202ENST00000376659 PPM1EQ8WY54 764 aa10.21□□□□□ -0.78
TRIM39-202ENST00000376659 NCAPGQ9BPX3 1015 aa10.21□□□□□ -0.78
TRIM39-202ENST00000376659 C1orf112Q9NSG2 853 aa10.21□□□□□ -0.78
TRIM39-202ENST00000376659 PARP2Q9UGN5 583 aa10.21□□□□□ -0.78
TRIM39-202ENST00000376659 LIASO43766 372 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 CREB1P16220 341 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 HPDP32754 393 aaPredicted RBP10.2□□□□□ -0.78
TRIM39-202ENST00000376659 RPL7AP62424 266 aaKnown RBP10.2□□□□□ -0.78
TRIM39-202ENST00000376659 ANKRD20A8PQ5CZ79 823 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 TSHZ1Q6ZSZ6 1077 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 SUGP1Q8IWZ8 645 aaKnown RBP10.2□□□□□ -0.78
TRIM39-202ENST00000376659 KIAA0319LQ8IZA0 1049 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 CYP4X1Q8N118 509 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 TFAP2BQ92481 460 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 SNF8Q96H20 258 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 SEC16BQ96JE7 1060 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 TARS2Q9BW92 718 aaKnown RBP10.2□□□□□ -0.78
TRIM39-202ENST00000376659 ROPN1BQ9BZX4 212 aaPredicted RBP10.2□□□□□ -0.78
TRIM39-202ENST00000376659 ROPN1Q9HAT0 212 aaPredicted RBP10.2□□□□□ -0.78
TRIM39-202ENST00000376659 GGA3Q9NZ52 723 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 NINJ2Q9NZG7 142 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 RASAL2Q9UJF2 1139 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 CD2APQ9Y5K6 639 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 PASKQ96RG2 1323 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 SCN1AP35498 2009 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 EBAG9O00559 213 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 ASAP2O43150 1006 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 ECEL1O95672 775 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 RALAP11233 206 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 MAPK4P31152 587 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 PIK3CAP42336 1068 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 SLMAPQ14BN4 828 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 CCNG2Q16589 344 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 JDP2Q8WYK2 163 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 PWWP2AQ96N64 755 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 PRKAG3Q9UGI9 489 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 SIX4Q9UIU6 781 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 FARP1Q9Y4F1 1045 aaPredicted RBP10.2□□□□□ -0.78
TRIM39-202ENST00000376659 LSM8O95777 96 aaKnown RBP10.2□□□□□ -0.78
TRIM39-202ENST00000376659 ITIH2P19823 946 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 STXBP2Q15833 593 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 KRT71Q3SY84 523 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 LRRC38Q5VT99 294 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 NFKBIZQ9BYH8 718 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 SDCBP2Q9H190 292 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 FZD8Q9H461 694 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 PTPN22Q9Y2R2 807 aa10.2□□□□□ -0.78
TRIM39-202ENST00000376659 GNA15P30679 374 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms