RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 SPDYE16A6NNV3 312 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-203ENST00000376619 M0QZ92 97 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 EXTL3O43909 919 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 SYF2O95926 243 aaKnown RBP11.78□□□□□ -0.52
HDAC6-203ENST00000376619 SHBGP04278 402 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 APRTP07741 180 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 CHRNA3P32297 505 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 DNAAF3Q8N9W5 541 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 CLEC4DQ8WXI8 215 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 BEGAINQ9BUH8 593 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 LRRC4Q9HBW1 653 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 METTL5Q9NRN9 209 aaKnown RBP11.78□□□□□ -0.52
HDAC6-203ENST00000376619 HMGB1P1B2RPK0 211 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-203ENST00000376619 CST3P01034 146 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-203ENST00000376619 INHBAP08476 426 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 CDK17Q00537 523 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 LAMTOR4Q0VGL1 99 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 FAF2Q96CS3 445 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 COG5Q9UP83 839 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 AKAP11Q9UKA4 1901 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 A0A0G2JND7 137 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 H0Y3Z8 333 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 ZBED1O96006 694 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 MOCS2O96007 188 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-203ENST00000376619 EZRP15311 586 aaKnown RBP11.78□□□□□ -0.52
HDAC6-203ENST00000376619 GLRA2P23416 452 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 MAPK7Q13164 816 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 SEMA3FQ13275 785 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 EEF1DP3Q658K8 133 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 BTNL9Q6UXG8 535 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 FAM71DQ8N9W8 422 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 ZNF606Q8WXB4 792 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 LENG1Q96BZ8 264 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-203ENST00000376619 GPRASP2Q96D09 838 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 SMC6Q96SB8 1091 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 AP5M1Q9H0R1 490 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 WNT8AQ9H1J5 351 aa11.78□□□□□ -0.52
HDAC6-203ENST00000376619 KAT6AQ92794 2004 aa11.77□□□□□ -0.52
HDAC6-203ENST00000376619 DCDC2CA8MYV0 355 aa11.77□□□□□ -0.52
HDAC6-203ENST00000376619 TCP11X1B4DZS4 312 aa11.77□□□□□ -0.52
HDAC6-203ENST00000376619 PODXLO00592 558 aa11.77□□□□□ -0.52
HDAC6-203ENST00000376619 BANF1O75531 89 aa11.77□□□□□ -0.52
HDAC6-203ENST00000376619 ACAD10Q6JQN1 1059 aa11.77□□□□□ -0.52
HDAC6-203ENST00000376619 CCDC197Q8NCU1 140 aa11.77□□□□□ -0.52
HDAC6-203ENST00000376619 SLC17A8Q8NDX2 589 aa11.77□□□□□ -0.52
HDAC6-203ENST00000376619 OR6J1Q8NGC5 347 aa11.77□□□□□ -0.52
HDAC6-203ENST00000376619 FERMT1Q9BQL6 677 aa11.77□□□□□ -0.52
HDAC6-203ENST00000376619 ISCUQ9H1K1 167 aa11.77□□□□□ -0.52
HDAC6-203ENST00000376619 KCNG1Q9UIX4 513 aa11.77□□□□□ -0.52
HDAC6-203ENST00000376619 MYH8P13535 1937 aa11.77□□□□□ -0.52
HDAC6-203ENST00000376619 NID2Q14112 1375 aa11.77□□□□□ -0.52
HDAC6-203ENST00000376619 GMNCA6NCL1 334 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 TJP3O95049 919 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 CFHP08603 1231 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 COILP38432 576 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-203ENST00000376619 RPL21P46778 160 aaKnown RBP11.77□□□□□ -0.53
HDAC6-203ENST00000376619 PPP2R5EQ16537 467 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 RWDD4Q6NW29 188 aaKnown RBP11.77□□□□□ -0.53
HDAC6-203ENST00000376619 ANKRD13AQ8IZ07 590 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 NACA2Q9H009 215 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 SLITRK6Q9H5Y7 841 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 KLHL14Q9P2G3 628 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 CHMP2BQ9UQN3 213 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 MDH1P40925 334 aaKnown RBP11.77□□□□□ -0.53
HDAC6-203ENST00000376619 SESN2P58004 480 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-203ENST00000376619 MYO1EQ12965 1108 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 KIF2BQ8N4N8 673 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 MAIP1Q8WWC4 291 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 NEUROG2Q9H2A3 272 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 GPRC5DQ9NZD1 345 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 KCND2Q9NZV8 630 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 MARCOQ9UEW3 520 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-203ENST00000376619 UBIAD1Q9Y5Z9 338 aa11.77□□□□□ -0.53
HDAC6-203ENST00000376619 CEP290O15078 2479 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 O00370 1275 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 MAP2K7O14733 419 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 PHF2O75151 1096 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 CELF2O95319 508 aaKnown RBP11.76□□□□□ -0.53
HDAC6-203ENST00000376619 ACAT1P24752 427 aaKnown RBP11.76□□□□□ -0.53
HDAC6-203ENST00000376619 PDE1BQ01064 536 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 SP2Q02086 613 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 CLUL1Q15846 466 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 TAF12Q16514 161 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 TTMPQ5BVD1 217 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 SCN4BQ8IWT1 228 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 LRRC8CQ8TDW0 803 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 PPP1R36Q96LQ0 422 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 ACAP3Q96P50 834 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 JPH2Q9BR39 696 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-203ENST00000376619 CARD9Q9H257 536 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 KIAA1586Q9HCI6 787 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 PARVAQ9NVD7 372 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 PRDM4Q9UKN5 801 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 MAP1BP46821 2468 aaKnown RBP11.76□□□□□ -0.53
HDAC6-203ENST00000376619 GLTPD2A6NH11 291 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 PIK3CDO00329 1044 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 ADSSP30520 456 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 MSH2P43246 934 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 ALDH5A1P51649 535 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-203ENST00000376619 YWHAEP62258 255 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms