RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.11■□□□□ 0.81
HDAC6-202ENST00000376610 OTOGLQ3ZCN5 2332 aa20.11■□□□□ 0.81
HDAC6-202ENST00000376610 F5P12259 2224 aa20.11■□□□□ 0.81
HDAC6-202ENST00000376610 TTC26A0AVF1 554 aa20.1■□□□□ 0.81
HDAC6-202ENST00000376610 M0QZQ0 153 aa20.1■□□□□ 0.81
HDAC6-202ENST00000376610 TBCAO75347 108 aaKnown RBP20.1■□□□□ 0.81
HDAC6-202ENST00000376610 CENPBP07199 599 aaPredicted RBP20.1■□□□□ 0.81
HDAC6-202ENST00000376610 MYL4P12829 197 aa20.1■□□□□ 0.81
HDAC6-202ENST00000376610 ARSHQ5FYA8 562 aa20.1■□□□□ 0.81
HDAC6-202ENST00000376610 FAM78AQ5JUQ0 283 aa20.1■□□□□ 0.81
HDAC6-202ENST00000376610 ERMP1Q7Z2K6 904 aa20.1■□□□□ 0.81
HDAC6-202ENST00000376610 SMARCD2Q92925 531 aa20.1■□□□□ 0.81
HDAC6-202ENST00000376610 IRF7Q92985 503 aa20.1■□□□□ 0.81
HDAC6-202ENST00000376610 TBX20Q9UMR3 447 aa20.1■□□□□ 0.81
HDAC6-202ENST00000376610 MTF2Q9Y483 593 aaPredicted RBP20.1■□□□□ 0.81
HDAC6-202ENST00000376610 PATJQ8NI35 1801 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 MAN2B1O00754 1011 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 OGTO15294 1046 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 OAZ2O95190 189 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 CSTF1Q05048 431 aaKnown RBP20.09■□□□□ 0.81
HDAC6-202ENST00000376610 GRM2Q14416 872 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 LARP1BQ659C4 914 aaKnown RBP20.09■□□□□ 0.81
HDAC6-202ENST00000376610 RNF19BQ6ZMZ0 732 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 CD302Q8IX05 232 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 ATRIPQ8WXE1 791 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 RUBCNQ92622 972 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 KCNN1Q92952 543 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 FAM212AQ96EL1 285 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 ASB16Q96NS5 453 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 MSTO1Q9BUK6 570 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 GPR88Q9GZN0 384 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 ZHX3Q9H4I2 956 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 SLITRK6Q9H5Y7 841 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 CEP72Q9P209 647 aa20.09■□□□□ 0.81
HDAC6-202ENST00000376610 TIMM13Q9Y5L4 95 aaPredicted RBP20.09■□□□□ 0.81
HDAC6-202ENST00000376610 COL4A3Q01955 1670 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 OR6C75A6NL08 312 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 LACTBL1A8MY62 500 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 SPTLC1O15269 473 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 TRAK2O60296 914 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 PSMC3P17980 439 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 FCARP24071 287 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 TARSP26639 723 aaKnown RBP20.08■□□□□ 0.81
HDAC6-202ENST00000376610 LONP1P36776 959 aaKnown RBP20.08■□□□□ 0.81
HDAC6-202ENST00000376610 TNFSF9P41273 254 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 CCR2P41597 374 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 RPS9P46781 194 aaKnown RBP20.08■□□□□ 0.81
HDAC6-202ENST00000376610 EPHB3P54753 998 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 BRAPQ7Z569 592 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 HS6ST3Q8IZP7 471 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 BEST2Q8NFU1 509 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 DEPDC1BQ8WUY9 529 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 CLDN23Q96B33 292 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 HAPLN2Q9GZV7 340 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 YIPF1Q9Y548 306 aa20.08■□□□□ 0.81
HDAC6-202ENST00000376610 PIGRP01833 764 aa20.07■□□□□ 0.8
HDAC6-202ENST00000376610 ODC1P11926 461 aa20.07■□□□□ 0.8
HDAC6-202ENST00000376610 PAX3P23760 479 aa20.07■□□□□ 0.8
HDAC6-202ENST00000376610 ALDH1A3P47895 512 aa20.07■□□□□ 0.8
HDAC6-202ENST00000376610 ZBTB6Q15916 424 aa20.07■□□□□ 0.8
HDAC6-202ENST00000376610 ENOX2Q16206 610 aaKnown RBP20.07■□□□□ 0.8
HDAC6-202ENST00000376610 OVOS1Q6IE37 1185 aa20.07■□□□□ 0.8
HDAC6-202ENST00000376610 ARMCX5Q6P1M9 558 aa20.07■□□□□ 0.8
HDAC6-202ENST00000376610 MAML2Q8IZL2 1156 aaPredicted RBP20.07■□□□□ 0.8
HDAC6-202ENST00000376610 E2F7Q96AV8 911 aa20.07■□□□□ 0.8
HDAC6-202ENST00000376610 PGLYRP2Q96PD5 576 aa20.07■□□□□ 0.8
HDAC6-202ENST00000376610 PCDHGA2Q9Y5H1 932 aa20.07■□□□□ 0.8
HDAC6-202ENST00000376610 PLCG1P19174 1290 aa20.06■□□□□ 0.8
HDAC6-202ENST00000376610 TYMPP19971 482 aa20.06■□□□□ 0.8
HDAC6-202ENST00000376610 GDI1P31150 447 aa20.06■□□□□ 0.8
HDAC6-202ENST00000376610 AARSP49588 968 aaKnown RBP eCLIP20.06■□□□□ 0.8
HDAC6-202ENST00000376610 ZNF131P52739 623 aa20.06■□□□□ 0.8
HDAC6-202ENST00000376610 EPHA5P54756 1037 aa20.06■□□□□ 0.8
HDAC6-202ENST00000376610 GPR17Q13304 367 aa20.06■□□□□ 0.8
HDAC6-202ENST00000376610 POTEHQ6S545 545 aa20.06■□□□□ 0.8
HDAC6-202ENST00000376610 YAF2Q8IY57 180 aa20.06■□□□□ 0.8
HDAC6-202ENST00000376610 KIAA2013Q8IYS2 634 aa20.06■□□□□ 0.8
HDAC6-202ENST00000376610 ZSCAN18Q8TBC5 510 aaPredicted RBP20.06■□□□□ 0.8
HDAC6-202ENST00000376610 RAD54LQ92698 747 aa20.06■□□□□ 0.8
HDAC6-202ENST00000376610 NDRG2Q9UN36 371 aaKnown RBP20.06■□□□□ 0.8
HDAC6-202ENST00000376610 ZNF263O14978 683 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 OR4Q2P0C623 313 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 GUCY2FP51841 1108 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 DUSP4Q13115 394 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 MYBPC2Q14324 1141 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 MCM6Q14566 821 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 PPP2R5DQ14738 602 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 KARSQ15046 597 aaKnown RBP20.05■□□□□ 0.8
HDAC6-202ENST00000376610 TEAD2Q15562 447 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 SPATA1Q5VX52 437 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 LARP4BQ92615 738 aaKnown RBP20.05■□□□□ 0.8
HDAC6-202ENST00000376610 SECISBP2LQ93073 1101 aaKnown RBP20.05■□□□□ 0.8
HDAC6-202ENST00000376610 ZSWIM3Q96MP5 696 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 TRPV4Q9HBA0 871 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 ZNF334Q9HCZ1 680 aaPredicted RBP20.05■□□□□ 0.8
HDAC6-202ENST00000376610 TRPV5Q9NQA5 729 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 ZSCAN32Q9NX65 697 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 NCDNQ9UBB6 729 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 CEP250Q9BV73 2442 aa20.05■□□□□ 0.8
HDAC6-202ENST00000376610 CACNA1AO00555 2505 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms