RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 MAGEB18Q96M61 343 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 SCLT1Q96NL6 688 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 JPH1Q9HDC5 661 aaPredicted RBP11.33□□□□□ -0.6
ABCF1-202ENST00000376545 SLC9A2Q9UBY0 812 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 AGAP1Q9UPQ3 857 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 THAP12O43422 761 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 ALADP13716 330 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 ATP4AP20648 1035 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 GCAP28676 217 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 ARL2P36404 184 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 ACTR2P61160 394 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 ZNF268Q14587 947 aaPredicted RBP11.33□□□□□ -0.6
ABCF1-202ENST00000376545 XKR3Q5GH77 459 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 DAB2IPQ5VWQ8 1189 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 SPOPLQ6IQ16 392 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 CGB2Q6NT52 195 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 CEP128Q6ZU80 1094 aa11.33□□□□□ -0.6
ABCF1-202ENST00000376545 TRMT1LQ7Z2T5 733 aaKnown RBP11.33□□□□□ -0.6
ABCF1-202ENST00000376545 NSUN6Q8TEA1 469 aaKnown RBP11.33□□□□□ -0.6
ABCF1-202ENST00000376545 AGO2Q9UKV8 859 aaKnown RBP11.33□□□□□ -0.6
ABCF1-202ENST00000376545 MAFBQ9Y5Q3 323 aaPredicted RBP11.33□□□□□ -0.6
ABCF1-202ENST00000376545 MAGEB2O15479 319 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 ATP6V1G2O95670 118 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 CLTAP09496 248 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 PIK3CAP42336 1068 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 LIG4P49917 911 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 ACVR2BQ13705 512 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 LRRC14Q15048 493 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 TRIP13Q15645 432 aaPredicted RBP11.32□□□□□ -0.6
ABCF1-202ENST00000376545 C2CD6Q53TS8 623 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 LRRC38Q5VT99 294 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 GBP7Q8N8V2 638 aaPredicted RBP11.32□□□□□ -0.6
ABCF1-202ENST00000376545 FEZF2Q8TBJ5 459 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 CDHR1Q96JP9 859 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 PWWP2AQ96N64 755 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 CGRRF1Q99675 332 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 PLCD4Q9BRC7 762 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 PORCNQ9H237 461 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 DHX33Q9H6R0 707 aaKnown RBP11.32□□□□□ -0.6
ABCF1-202ENST00000376545 FGFR1OP2Q9NVK5 253 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 ADAM22Q9P0K1 906 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 MCM8Q9UJA3 840 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 ZNF214Q9UL59 606 aaPredicted RBP11.32□□□□□ -0.6
ABCF1-202ENST00000376545 A0A0B4J269 797 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 LIASO43766 372 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 LDHAP00338 332 aaKnown RBP11.32□□□□□ -0.6
ABCF1-202ENST00000376545 BRAFP15056 766 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 MMP8P22894 467 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 TBXAS1P24557 533 aaPredicted RBP11.32□□□□□ -0.6
ABCF1-202ENST00000376545 GNA15P30679 374 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 NAMPTP43490 491 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 NCALDP61601 193 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 LMNB2Q03252 620 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 IZUMO3Q5VZ72 239 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 LMBRD2Q68DH5 695 aaPredicted RBP11.32□□□□□ -0.6
ABCF1-202ENST00000376545 SLFN12LQ6IEE8 588 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 RCOR2Q8IZ40 523 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 CCHCR1Q8TD31 782 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 BICD1Q96G01 975 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 C12orf42Q96LP6 360 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 FNBP1Q96RU3 617 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 HEMGNQ9BXL5 484 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 PARVAQ9NVD7 372 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 SEPT9Q9UHD8 586 aaPredicted RBP11.32□□□□□ -0.6
ABCF1-202ENST00000376545 ZNF112Q9UJU3 913 aa11.32□□□□□ -0.6
ABCF1-202ENST00000376545 DRG1Q9Y295 367 aaKnown RBP11.32□□□□□ -0.6
ABCF1-202ENST00000376545 TMEM191CA6NGB0 347 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 SUN1O94901 812 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 UBOX5O94941 541 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 GH1P01241 217 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 TMEM191BP0C7N4 346 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 SUPT20HL2P0C7V6 817 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 TNNI1P19237 187 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 BACE1P56817 501 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 MCL1Q07820 350 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 CCDC15Q0P6D6 951 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 EMC2Q15006 297 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 RASA2Q15283 850 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 SUPT20HL1Q3ZLR7 823 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 RNF43Q68DV7 783 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 PHLDB2Q86SQ0 1253 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 NIM1KQ8IY84 436 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 C11orf70Q9BRQ4 267 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 CCDC113Q9H0I3 377 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 IP6K2Q9UHH9 426 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 ARL2BPQ9Y2Y0 163 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 NUB1Q9Y5A7 615 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 SSC5DA1L4H1 1573 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 IGKV6D-21A0A0A0MT36 114 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 FOXO6A8MYZ6 492 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 DNALI1O14645 258 aaPredicted RBP11.31□□□□□ -0.6
ABCF1-202ENST00000376545 ATP2C2O75185 946 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 GLRA2P23416 452 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 SLC8A1P32418 973 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 ICAM3P32942 547 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 MAGEA4P43358 317 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 COPS2P61201 443 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 ZNF252P-AS1Q0IIN9 211 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 NFX1Q12986 1120 aaKnown RBP11.31□□□□□ -0.6
ABCF1-202ENST00000376545 TNFAIP1Q13829 316 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms