RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 NOC2LQ9Y3T9 749 aaKnown RBP22.72■■□□□ 1.23
HLA-C-201ENST00000376228 RIOK3O14730 519 aaKnown RBP22.72■■□□□ 1.23
HLA-C-201ENST00000376228 TSPAN1O60635 241 aa22.72■■□□□ 1.23
HLA-C-201ENST00000376228 VNN1O95497 513 aa22.72■■□□□ 1.23
HLA-C-201ENST00000376228 CLTAP09496 248 aa22.72■■□□□ 1.23
HLA-C-201ENST00000376228 HARSP12081 509 aaKnown RBP22.72■■□□□ 1.23
HLA-C-201ENST00000376228 NFX1Q12986 1120 aaKnown RBP22.72■■□□□ 1.23
HLA-C-201ENST00000376228 NAB2Q15742 525 aa22.72■■□□□ 1.23
HLA-C-201ENST00000376228 TMEM132AQ24JP5 1023 aa22.72■■□□□ 1.23
HLA-C-201ENST00000376228 WDR44Q5JSH3 913 aa22.72■■□□□ 1.23
HLA-C-201ENST00000376228 OLIG1Q8TAK6 271 aa22.72■■□□□ 1.23
HLA-C-201ENST00000376228 LINC01599Q8WXQ3 324 aa22.72■■□□□ 1.23
HLA-C-201ENST00000376228 NAGPAQ9UK23 515 aa22.72■■□□□ 1.23
HLA-C-201ENST00000376228 INTUQ9ULD6 942 aa22.72■■□□□ 1.23
HLA-C-201ENST00000376228 GUCA1BQ9UMX6 200 aa22.72■■□□□ 1.23
HLA-C-201ENST00000376228 CITO14578 2027 aa22.71■■□□□ 1.23
HLA-C-201ENST00000376228 MYH10P35580 1976 aa22.71■■□□□ 1.23
HLA-C-201ENST00000376228 PRUNE2Q8WUY3 3088 aa22.71■■□□□ 1.23
HLA-C-201ENST00000376228 BTNL10A8MVZ5 291 aa22.71■■□□□ 1.23
HLA-C-201ENST00000376228 ERLIN2O94905 339 aa22.71■■□□□ 1.23
HLA-C-201ENST00000376228 ENOX2Q16206 610 aaKnown RBP22.71■■□□□ 1.23
HLA-C-201ENST00000376228 DUOXA2Q1HG44 320 aa22.71■■□□□ 1.23
HLA-C-201ENST00000376228 PPM1KQ8N3J5 372 aa22.71■■□□□ 1.23
HLA-C-201ENST00000376228 RNF10Q8N5U6 811 aaKnown RBP22.71■■□□□ 1.23
HLA-C-201ENST00000376228 USP38Q8NB14 1042 aa22.71■■□□□ 1.23
HLA-C-201ENST00000376228 SCLT1Q96NL6 688 aa22.71■■□□□ 1.23
HLA-C-201ENST00000376228 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.71■■□□□ 1.23
HLA-C-201ENST00000376228 C1orf112Q9NSG2 853 aa22.71■■□□□ 1.23
HLA-C-201ENST00000376228 SQORQ9Y6N5 450 aa22.71■■□□□ 1.23
HLA-C-201ENST00000376228 COL4A4P53420 1690 aaPredicted RBP22.7■■□□□ 1.22
HLA-C-201ENST00000376228 RPS6KA5O75582 802 aa22.7■■□□□ 1.22
HLA-C-201ENST00000376228 DARSP14868 501 aaKnown RBP22.7■■□□□ 1.22
HLA-C-201ENST00000376228 CRYBB1P53674 252 aaPredicted RBP22.7■■□□□ 1.22
HLA-C-201ENST00000376228 TAP1Q03518 808 aa22.7■■□□□ 1.22
HLA-C-201ENST00000376228 BIRC3Q13489 604 aa22.7■■□□□ 1.22
HLA-C-201ENST00000376228 TUBB2AQ13885 445 aa22.7■■□□□ 1.22
HLA-C-201ENST00000376228 SEZ6Q53EL9 994 aa22.7■■□□□ 1.22
HLA-C-201ENST00000376228 APBB1IPQ7Z5R6 666 aaPredicted RBP22.7■■□□□ 1.22
HLA-C-201ENST00000376228 THNSL1Q8IYQ7 743 aa22.7■■□□□ 1.22
HLA-C-201ENST00000376228 SLC35F6Q8N357 371 aa22.7■■□□□ 1.22
HLA-C-201ENST00000376228 OR5B17Q8NGF7 314 aa22.7■■□□□ 1.22
HLA-C-201ENST00000376228 TOP1MTQ969P6 601 aa22.7■■□□□ 1.22
HLA-C-201ENST00000376228 RAD9AQ99638 391 aa22.7■■□□□ 1.22
HLA-C-201ENST00000376228 TUBB2BQ9BVA1 445 aa22.7■■□□□ 1.22
HLA-C-201ENST00000376228 RPF1Q9H9Y2 349 aaKnown RBP22.7■■□□□ 1.22
HLA-C-201ENST00000376228 TRIM10Q9UDY6 481 aa22.7■■□□□ 1.22
HLA-C-201ENST00000376228 TTC3P53804 2025 aa22.7■■□□□ 1.22
HLA-C-201ENST00000376228 NLRC5Q86WI3 1866 aa22.7■■□□□ 1.22
HLA-C-201ENST00000376228 DDX3XO00571 662 aaKnown RBP eCLIP22.69■■□□□ 1.223e-9■■□□□ 12.3
HLA-C-201ENST00000376228 ENPP3O14638 875 aa22.69■■□□□ 1.22
HLA-C-201ENST00000376228 PNMA6AP0CW24 399 aaPredicted RBP22.69■■□□□ 1.22
HLA-C-201ENST00000376228 FOSL2P15408 326 aa22.69■■□□□ 1.22
HLA-C-201ENST00000376228 AXLP30530 894 aa22.69■■□□□ 1.22
HLA-C-201ENST00000376228 PIK3CAP42336 1068 aa22.69■■□□□ 1.22
HLA-C-201ENST00000376228 DCAF4L1Q3SXM0 396 aa22.69■■□□□ 1.22
HLA-C-201ENST00000376228 LMBRD2Q68DH5 695 aaPredicted RBP22.69■■□□□ 1.22
HLA-C-201ENST00000376228 ALKBH5Q6P6C2 394 aaKnown RBP22.69■■□□□ 1.22
HLA-C-201ENST00000376228 RTN4RL1Q86UN2 441 aaPredicted RBP22.69■■□□□ 1.22
HLA-C-201ENST00000376228 KAT5Q92993 513 aa22.69■■□□□ 1.22
HLA-C-201ENST00000376228 TATDN2Q93075 761 aa22.69■■□□□ 1.22
HLA-C-201ENST00000376228 ADPGKQ9BRR6 497 aa22.69■■□□□ 1.22
HLA-C-201ENST00000376228 ASB7Q9H672 318 aa22.69■■□□□ 1.22
HLA-C-201ENST00000376228 RALGAPA2Q2PPJ7 1873 aa22.69■■□□□ 1.22
HLA-C-201ENST00000376228 REV3LO60673 3130 aa22.68■■□□□ 1.22
HLA-C-201ENST00000376228 IBSPP21815 317 aaPredicted RBP22.68■■□□□ 1.22
HLA-C-201ENST00000376228 NCBP1Q09161 790 aaKnown RBP22.68■■□□□ 1.22
HLA-C-201ENST00000376228 FAM228AQ86W67 206 aa22.68■■□□□ 1.22
HLA-C-201ENST00000376228 GPIHBP1Q8IV16 184 aa22.68■■□□□ 1.22
HLA-C-201ENST00000376228 SECISBP2LQ93073 1101 aaKnown RBP22.68■■□□□ 1.22
HLA-C-201ENST00000376228 ERVK-5Q9HDB9 667 aa22.68■■□□□ 1.22
HLA-C-201ENST00000376228 ST3GAL5Q9UNP4 418 aa22.68■■□□□ 1.22
HLA-C-201ENST00000376228 RFXAPO00287 272 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 CSDE1O75534 798 aaKnown RBP22.67■■□□□ 1.22
HLA-C-201ENST00000376228 STAG3L1P0CL83 205 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 EIF4BP23588 611 aaKnown RBP22.67■■□□□ 1.22
HLA-C-201ENST00000376228 NCOA4Q13772 614 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 TRAPPC11Q7Z392 1133 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 NT5DC4Q86YG4 428 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 CD302Q8IX05 232 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 CEP120Q8N960 986 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 TRIM58Q8NG06 486 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 FAXDC2Q96IV6 333 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 YME1L1Q96TA2 773 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 AGPAT1Q99943 283 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 MTUS1Q9ULD2 1270 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 TFR2Q9UP52 801 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 INSL6Q9Y581 213 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 TRANK1O15050 2925 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 CTAGE9A4FU28 777 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 EPOPA6NHQ4 379 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 MGEA5O60502 916 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 ASS1P00966 412 aaKnown RBP22.67■■□□□ 1.22
HLA-C-201ENST00000376228 TBXAS1P24557 533 aaPredicted RBP22.67■■□□□ 1.22
HLA-C-201ENST00000376228 HOXA11P31270 313 aaPredicted RBP22.67■■□□□ 1.22
HLA-C-201ENST00000376228 GRM5P41594 1212 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 HTRA4P83105 476 aaPredicted RBP22.67■■□□□ 1.22
HLA-C-201ENST00000376228 LNX1Q8TBB1 728 aaPredicted RBP22.67■■□□□ 1.22
HLA-C-201ENST00000376228 ARNTL2Q8WYA1 636 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 CPB2Q96IY4 423 aa22.67■■□□□ 1.22
HLA-C-201ENST00000376228 NAPGQ99747 312 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms